RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PIK3CGP48736 1102 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 RPIAP49247 311 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 HNMTP50135 292 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 CLCNKAP51800 687 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 ALDH18A1P54886 795 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 ACTR1AP61163 376 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TIAL1Q01085 375 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 DMPKQ09013 629 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 DMWDQ09019 674 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TGFBIQ15582 683 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 OR4D1Q15615 310 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 SULT1C3Q6IMI6 304 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 ZC3H14Q6PJT7 736 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 BMP8AQ7Z5Y6 402 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 PTGR2Q8N8N7 351 aaPredicted RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TMEM105Q8N8V8 129 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 PHC3Q8NDX5 983 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 OR1E3Q8WZA6 343 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 ZNF75CPQ92670 426 aaPredicted RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TSACCQ96A04 125 aaPredicted RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 ATP6V1E2Q96A05 226 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 PTERQ96BW5 349 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 CXorf40BQ96DE9 158 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 PITPNM3Q9BZ71 974 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 WWP1Q9H0M0 922 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 STN1Q9H668 368 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 RDH14Q9HBH5 336 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TM9SF3Q9HD45 589 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 OXSMQ9NWU1 459 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 TRNAU1APQ9NX07 287 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 APOBEC3BQ9UH17 382 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 LNPEPQ9UIQ6 1025 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 PSMD13Q9UNM6 376 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 A0A1B0GTW7 788 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 G3V2L1 256 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 STX16-NPEPL1H3BU86 382 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TLR4O00206 839 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 STX16O14662 325 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 KLF11O14901 512 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SCAMP1O15126 338 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SGTAO43765 313 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 DLX3O60479 287 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 CCNT2O60583 730 aaKnown RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 LILRB5O75023 590 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SUPT7LO94864 414 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TSPAN12O95859 305 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 JUNDP17535 347 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 RPL10P27635 214 aaKnown RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 NDUFS1P28331 727 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 PPM1FP49593 454 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 HK3P52790 923 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 DNAJB13P59910 316 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 HERVK_113P63132 956 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 CDKL1Q00532 357 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 NFKB2Q00653 900 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TSTA3Q13630 321 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 GBX1Q14549 363 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ELOCQ15369 112 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 RBBP7Q16576 425 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ALG11Q2TAA5 492 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 CDKL4Q5MAI5 379 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 METRNLQ641Q3 311 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 PMS2CLQ68D20 193 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ANKS6Q68DC2 871 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC30A9Q6PML9 568 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 PRR23BQ6ZRT6 265 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ZCCHC23Q6ZST2 131 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TAF8Q7Z7C8 310 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ZNF547Q8IVP9 402 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 DCUN1D3Q8IWE4 304 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 HOMEZQ8IX15 550 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ASB11Q8WXH4 323 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TFGQ92734 400 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 RAD51AP1Q96B01 352 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 GRAMD1AQ96CP6 724 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 CCDC138Q96M89 665 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 C12orf66Q96MD2 445 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 GPR78Q96P69 363 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ATOH8Q96SQ7 321 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TRMOQ9BU70 441 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 RAB11FIP5Q9BXF6 653 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC12A9Q9BXP2 914 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 CCDC134Q9H6E4 229 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 IMP3Q9NV31 184 aaKnown RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 ZSCAN32Q9NX65 697 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 SIRPGQ9P1W8 387 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 OPTCQ9UBM4 332 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 POLG2Q9UHN1 485 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 TDRKHQ9Y2W6 561 aaKnown RBP10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 DGKBQ9Y6T7 804 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 COLEC10Q9Y6Z7 277 aa10.04□□□□□ -0.8
PRPF38A-202ENST00000474048 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms