RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TTI1O43156 1089 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 KIF1CO43896 1103 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 KDM1AO60341 852 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ANKRD34CP0C6C1 535 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CCR7P32248 378 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 LONRF1Q17RB8 773 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ZNF658BQ4V348 819 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 XKR5Q6UX68 686 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CEACAM20Q6UY09 585 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 GABPB2Q8TAK5 448 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 SKA2Q8WVK7 121 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 FCRL3Q96P31 734 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 TRIM56Q9BRZ2 755 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 DDA1Q9BW61 102 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 TRIM31Q9BZY9 425 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 C20orf96Q9NUD7 363 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 FOXJ2Q9P0K8 574 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CRYL1Q9Y2S2 319 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 TDRKHQ9Y2W6 561 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 SLC5A10A0PJK1 596 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 GSAPA4D1B5 854 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 C9orf172C9J069 976 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 H3BMM5 538 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 SMAPO00193 183 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 USP1O94782 785 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 POLR2CP19387 275 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 OGNP20774 298 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 RPS3P23396 243 aaKnown RBP eCLIP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ARNTP27540 789 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ARCN1P48444 511 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 UCNP55089 124 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 MC2RQ01718 297 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 MORF4L2Q15014 288 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 BBS9Q3SYG4 887 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ANKS6Q68DC2 871 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ZNF470Q6ECI4 717 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 OTOAQ7RTW8 1153 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 PRSS42Q7Z5A4 293 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 TMEM135Q86UB9 458 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 PDIK1LQ8N165 341 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CFAP61Q8NHU2 1237 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CALML6Q8TD86 181 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 UBXN4Q92575 508 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 SNF8Q96H20 258 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 SIGLEC10Q96LC7 697 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 TEFMQ96QE5 360 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CD180Q99467 661 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CTRCQ99895 268 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 TRIM51Q9BSJ1 452 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 ZNF768Q9H5H4 540 aaKnown RBP13.84□□□□□ -0.19
VAMP4-203ENST00000474047 FBXO8Q9NRD0 319 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 IL1RAPL1Q9NZN1 696 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 POLG2Q9UHN1 485 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 B3GALT1Q9Y5Z6 326 aa13.84□□□□□ -0.19
VAMP4-203ENST00000474047 PKD1L2Q7Z442 2459 aa13.83□□□□□ -0.19
VAMP4-203ENST00000474047 EFCAB8A8MWE9 144 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 E5RI56 91 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 MATN2O00339 956 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 NDC80O14777 642 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 MAP3K7O43318 606 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 RPN2P04844 631 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 LIPCP11150 499 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 PGAM1P18669 254 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 CHRM3P20309 590 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 MAGEA3P43357 314 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 TLE3Q04726 772 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 ABRQ12979 859 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 CYB5D1Q6P9G0 228 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 TBC1D21Q8IYX1 336 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 SIDT2Q8NBJ9 832 aaKnown RBP13.83□□□□□ -0.2
VAMP4-203ENST00000474047 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
VAMP4-203ENST00000474047 OR52E1Q8NGJ3 308 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 OR5AR1Q8NGP9 310 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 ZPBPQ9BS86 351 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 NAT9Q9BTE0 207 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 P2RY12Q9H244 342 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 ACSL6Q9UKU0 697 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 PCDHGA3Q9Y5H0 932 aa13.83□□□□□ -0.2
VAMP4-203ENST00000474047 DMXL2Q8TDJ6 3036 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 TLCD2A6NGC4 264 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 BHMG1C9JSJ3 638 aaPredicted RBP13.82□□□□□ -0.2
VAMP4-203ENST00000474047 STMND1H3BQB6 276 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 FANCGO15287 622 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 TTC4O95801 387 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 ESR1P03372 595 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 CDH3P22223 829 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 AOAHP28039 575 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 ITGA8P53708 1063 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 TMPRSS3P57727 454 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 PPP1CAP62136 330 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 CXADRP78310 365 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 DHX9Q08211 1270 aaKnown RBP13.82□□□□□ -0.2
VAMP4-203ENST00000474047 TYSND1Q2T9J0 566 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 TTC23LQ6PF05 361 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 MAATS1Q7Z4T9 603 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 AMIGO1Q86WK6 493 aa13.82□□□□□ -0.2
VAMP4-203ENST00000474047 CILP2Q8IUL8 1156 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms