RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 TCFL5Q9UL49 500 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 SNX7Q9UNH6 387 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 TFR2Q9UP52 801 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 EFR3BQ9Y2G0 817 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 AAR2Q9Y312 384 aaKnown RBP13□□□□□ -0.33
COPS7B-219ENST00000474042 ZNF451Q9Y4E5 1061 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 MAP4K5Q9Y4K4 846 aa13□□□□□ -0.33
COPS7B-219ENST00000474042 SNRNP200O75643 2136 aaKnown RBP13□□□□□ -0.33
COPS7B-219ENST00000474042 RP1L1Q8IWN7 2480 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 TMEM150CB9EJG8 249 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 CFAP99D6REC4 459 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 BTN3A3O00478 584 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 DDX3YO15523 660 aaKnown RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 LDB2O43679 373 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 VPS4BO75351 444 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 TMEM63AO94886 807 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 ATP1B2P14415 290 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 PTMSP20962 102 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 PRDX3P30048 256 aaKnown RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 HADHAP40939 763 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 CCL11P51671 97 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 VAV2P52735 878 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 KRT33BQ14525 404 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 FAM69BQ5VUD6 431 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 ZNF385CQ66K41 422 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 Q8NA96 180 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 GLIS1Q8NBF1 620 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 LCN9Q8WX39 176 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 NRTNQ99748 197 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 SRMSQ9H3Y6 488 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 TFB2MQ9H5Q4 396 aaKnown RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 ZDHHC3Q9NYG2 299 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 FEZ2Q9UHY8 353 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-219ENST00000474042 VPS4AQ9UN37 437 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 HIVEP3Q5T1R4 2406 aa12.99□□□□□ -0.33
COPS7B-219ENST00000474042 ESPL1Q14674 2120 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 MACROD2A1Z1Q3 448 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 H7C0S8 307 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 CCL22O00626 93 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 KCNN4O15554 427 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 RBP3P10745 1247 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 CYP2A7P20853 494 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 ACRV1P26436 265 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 MC4RP32245 332 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PREPP48147 710 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 CD151P48509 253 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 LMAN1P49257 510 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 ITGA1P56199 1179 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 EIF3EP60228 445 aaKnown RBP12.98□□□□□ -0.33
COPS7B-219ENST00000474042 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 RPA4Q13156 261 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 BOP1Q14137 746 aaKnown RBP12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PRPSAP1Q14558 356 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 NCF4Q15080 339 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 GPR33Q49SQ1 333 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PRR30Q53SZ7 412 aaPredicted RBP12.98□□□□□ -0.33
COPS7B-219ENST00000474042 SARM1Q6SZW1 724 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 MICALCLQ6ZW33 695 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 HPS6Q86YV9 775 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 ZBTB2Q8N680 514 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 FDCSPQ8NFU4 85 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 CCDC110Q8TBZ0 833 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 FERD3LQ96RJ6 166 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 TBL1YQ9BQ87 522 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 HGH1Q9BTY7 390 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 OSBPL8Q9BZF1 889 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 FAM96AQ9H5X1 160 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 MVB12BQ9H7P6 319 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 VPS37BQ9H9H4 285 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 PCDHA13Q9Y5I0 950 aa12.98□□□□□ -0.33
COPS7B-219ENST00000474042 UTP20O75691 2785 aaKnown RBP12.98□□□□□ -0.33
COPS7B-219ENST00000474042 UNC79Q9P2D8 2635 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 CCDC66A2RUB6 948 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 C2orf74A8MZ97 194 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 H3BMH7 237 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 IFRD1O00458 451 aaPredicted RBP12.97□□□□□ -0.33
COPS7B-219ENST00000474042 DPM1O60762 260 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 STK10O94804 968 aaKnown RBP12.97□□□□□ -0.33
COPS7B-219ENST00000474042 GSTM1P09488 218 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 PVRP15151 417 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 CTNNA2P26232 953 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 PDHA2P29803 388 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 CDKN1CP49918 316 aaPredicted RBP12.97□□□□□ -0.33
COPS7B-219ENST00000474042 GSTM4Q03013 218 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 ATP1A4Q13733 1029 aa12.97□□□□□ -0.33
COPS7B-219ENST00000474042 FHL5Q5TD97 284 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms