RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 LCN9Q8WX39 176 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 ZCCHC14Q8WYQ9 949 aaKnown RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 TGM7Q96PF1 710 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 SRMSQ9H3Y6 488 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 POLG2Q9UHN1 485 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 SLC24A2Q9UI40 661 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 TDRKHQ9Y2W6 561 aaKnown RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 LOXL2Q9Y4K0 774 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 PCDHGA8Q9Y5G5 932 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 TEX264Q9Y6I9 313 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 PTPRBP23467 1997 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 BRINP1O60477 761 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 TNFSF15O95150 251 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 THRAP10827 490 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 CSF2RBP32927 897 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 CAPZBP47756 277 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 GUCY2DQ02846 1103 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 ABRQ12979 859 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 PRKG2Q13237 762 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 TTLL9Q3SXZ7 439 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 GLE1Q53GS7 698 aaKnown RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 DNTTIP2Q5QJE6 756 aaKnown RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 TMEM164Q5U3C3 297 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 UGT3A1Q6NUS8 523 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 ZNF574Q6ZN55 896 aaPredicted RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 KIAA0408Q6ZU52 694 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 TMPRSS9Q7Z410 1059 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 CCDC25Q86WR0 208 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 IGDCC3Q8IVU1 814 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 TBC1D21Q8IYX1 336 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 SLC22A15Q8IZD6 547 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 RCBTB1Q8NDN9 531 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 OR4E2Q8NGC2 313 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 MDM1Q8TC05 714 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 LKAAEAR1Q8TD35 194 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 JPH3Q8WXH2 748 aaPredicted RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 ART4Q93070 314 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 BIRC8Q96P09 236 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 HGH1Q9BTY7 390 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 TMEM121BQ9BXQ6 578 aaPredicted RBP13.4□□□□□ -0.26
USF1-205ENST00000473969 FAM114A2Q9NRY5 505 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 THSD1Q9NS62 852 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 HRASLS2Q9NWW9 162 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 GRHL1Q9NZI5 618 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 ZFATQ9P243 1243 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 PISDQ9UG56 409 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 KNTC1P50748 2209 aa13.4□□□□□ -0.26
USF1-205ENST00000473969 TPRP12270 2363 aaKnown RBP13.39□□□□□ -0.27
USF1-205ENST00000473969 OR6C74A6NCV1 312 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 E7ESA3 106 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 MATN2O00339 956 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 NIPSNAP2O75323 286 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 VPS26AO75436 327 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 GPC4O75487 556 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 HAUS5O94927 633 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 SLCO2B1O94956 709 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 ACADLP28330 430 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
USF1-205ENST00000473969 ARL4DP49703 201 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 MAPK10P53779 464 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 MPP1Q00013 466 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 CFHR1Q03591 330 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 MGAT5Q09328 741 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
USF1-205ENST00000473969 CTSL3PQ5NE16 218 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 CACHD1Q5VU97 1274 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 STEAP4Q687X5 459 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 CEP128Q6ZU80 1094 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 FAM129CQ86XR2 697 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 RAB42Q8N4Z0 105 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 ZBTB2Q8N680 514 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 C2CD4AQ8NCU7 369 aaPredicted RBP13.39□□□□□ -0.27
USF1-205ENST00000473969 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 RSC1A1Q92681 617 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 CDKL2Q92772 493 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 FAM136AQ96C01 138 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 C9orf72Q96LT7 481 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 ZNF578Q96N58 590 aaPredicted RBP13.39□□□□□ -0.27
USF1-205ENST00000473969 RAB33BQ9H082 229 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 NSMCE4AQ9NXX6 385 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 DKK4Q9UBT3 224 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
USF1-205ENST00000473969 MTRF1LQ9UGC7 380 aaKnown RBP13.39□□□□□ -0.27
USF1-205ENST00000473969 GSAPA4D1B5 854 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 OR5K3A6NET4 321 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
USF1-205ENST00000473969 TP73O15350 636 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
USF1-205ENST00000473969 MAP3K7O43318 606 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 ITGA2BP08514 1039 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 HGFP14210 728 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 SHMT2P34897 504 aa13.38□□□□□ -0.27
USF1-205ENST00000473969 ERVPABLB-1P60509 514 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms