RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 NCEH1Q6PIU2 408 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 SUSD1Q6UWL2 747 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 FAM151BQ6UXP7 276 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 EFL1Q7Z2Z2 1120 aaKnown RBP10.75□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF548Q8NEK5 533 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF420Q8TAQ5 688 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-214ENST00000473778 WFDC5Q8TCV5 224 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 SNX19Q92543 992 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 CASD1Q96PB1 797 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 MBOAT4Q96T53 435 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.75□□□□□ -0.69
C9orf3-214ENST00000473778 ZFP14Q9HCL3 533 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 NUDT4Q9NZJ9 180 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 LHX3Q9UBR4 397 aa10.75□□□□□ -0.69
C9orf3-214ENST00000473778 FAF1Q9UNN5 650 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-214ENST00000473778 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
C9orf3-214ENST00000473778 KANSL1LA0AUZ9 987 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 ILVBLA1L0T0 632 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 C2orf78A6NCI8 922 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF840PA6NDX5 716 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 TMEM88BA6NKF7 163 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 FZD6O60353 706 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 CLDN11O75508 207 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 ALBP02768 609 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 ANXA6P08133 673 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PHC1P78364 1004 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PWP1Q13610 501 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 SPANXN4Q5MJ08 99 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 SULT1C3Q6IMI6 304 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 Q6ZNX1 250 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 R3HCC1LQ7Z5L2 792 aaKnown RBP10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PHACTR4Q8IZ21 702 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 BPIFB6Q8NFQ5 453 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 OR10Q1Q8NGQ4 319 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 CLHC1Q8NHS4 586 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 AURKBQ96GD4 344 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-214ENST00000473778 TBCDQ9BTW9 1192 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 TTLL2Q9BWV7 592 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 LHPPQ9H008 270 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 C8orf4Q9NR00 106 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 CORINQ9Y5Q5 1042 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 THRBP10828 461 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 MBL2P11226 248 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-214ENST00000473778 SLC2A4P14672 509 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 AGXTP21549 392 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PRKACGP22612 351 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 CRHBPP24387 322 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 GKP32189 559 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 SLC11A2P49281 568 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 NFATC3Q12968 1075 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 DPY19L1Q2PZI1 675 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF773Q6PK81 442 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 FRA10AC1Q70Z53 315 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 CLEC4FQ8N1N0 589 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 OR2T12Q8NG77 320 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 SLC13A3Q8WWT9 602 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 BHMTQ93088 406 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 RHBDF1Q96CC6 855 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PDLIM5Q96HC4 596 aaKnown RBP10.74□□□□□ -0.69
C9orf3-214ENST00000473778 C17orf80Q9BSJ5 609 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 NACA2Q9H009 215 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 EXD2Q9NVH0 621 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 PKD2L2Q9NZM6 624 aa10.74□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 A0A1B0GVM2 712 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 PRMT5O14744 637 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 TULP3O75386 442 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 DEAF1O75398 565 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 SEC14L2O76054 403 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 KCNH1O95259 989 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 HMGA1P17096 107 aaKnown RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 NR4A1P22736 598 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 EEF1B2P24534 225 aaKnown RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 HMGCLP35914 325 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 BMXP51813 675 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ACLYP53396 1101 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ZXDBP98169 803 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 PPP2R2BQ00005 443 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ZNF177Q13360 481 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 MEP1AQ16819 746 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 IMPG1Q17R60 797 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ZXDCQ2QGD7 858 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 GTF2IRD2BQ6EKJ0 949 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 MILR1Q7Z6M3 343 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 GTF2IRD2Q86UP8 949 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ABI1Q8IZP0 508 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 THAP11Q96EK4 314 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ITCHQ96J02 903 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ADGRE3Q9BY15 652 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 TM6SF2Q9BZW4 377 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 PAIP1Q9H074 479 aaKnown RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 PAK1IP1Q9NWT1 392 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-214ENST00000473778 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 A8MX80 341 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 G3V2T6 193 aa10.73□□□□□ -0.69
C9orf3-214ENST00000473778 ARVCFO00192 962 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms