RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SHBQ15464 509 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 TSNAXIP1Q2TAA8 658 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 C6orf132Q5T0Z8 1188 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 ZCCHC8Q6NZY4 707 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 IYDQ6PHW0 289 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 UNC5DQ6UXZ4 953 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 SLC25A45Q8N413 288 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 RAB42Q8N4Z0 105 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 OR2I1PQ8NGU4 316 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 SETD7Q8WTS6 366 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 SH3KBP1Q96B97 665 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 PGM2Q96G03 612 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 PDLIM5Q96HC4 596 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 HIST1H2AHQ96KK5 128 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 SLC30A3Q99726 388 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 HIST1H2AJQ99878 128 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 H2AFJQ9BTM1 129 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 OR52A5Q9H2C5 316 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 TRIT1Q9H3H1 467 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 SIRPGQ9P1W8 387 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 DCDC2Q9UHG0 476 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 MUC6Q6W4X9 2439 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 TRBV23OR9-2A0A075B6M9 112 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 FLRT2O43155 660 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 SLC35E2BP0CK96 405 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 PYGBP11216 843 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 CYP2A7P20853 494 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 GRK6P43250 576 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCM2-205ENST00000472223 CAPRIN2Q6IMN6 1127 aaKnown RBP16.47■□□□□ 0.23
CCM2-205ENST00000472223 FRA10AC1Q70Z53 315 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 RBM12BQ8IXT5 1001 aaKnown RBP16.47■□□□□ 0.23
CCM2-205ENST00000472223 LILRA3Q8N6C8 439 aaPredicted RBP16.47■□□□□ 0.23
CCM2-205ENST00000472223 EID2Q8N6I1 236 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 OR4C6Q8NH72 309 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 GIMAP7Q8NHV1 300 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 MCOLN3Q8TDD5 553 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 ISL2Q96A47 359 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 ALKBH8Q96BT7 664 aaKnown RBP16.47■□□□□ 0.23
CCM2-205ENST00000472223 SCYL1Q96KG9 808 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 DERL2Q9GZP9 239 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 MVB12BQ9H7P6 319 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 POLG2Q9UHN1 485 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 RUVBL2Q9Y230 463 aaKnown RBP16.47■□□□□ 0.23
CCM2-205ENST00000472223 CDYLQ9Y232 598 aa16.47■□□□□ 0.23
CCM2-205ENST00000472223 CCDC189A1A4V9 331 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 GOLGA8RI6L899 631 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 BTN3A1O00481 513 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 COPEO14579 308 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 SLC16A5O15375 505 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 RFPL1O75677 317 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 KLHL2O95198 593 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 GSTA1P08263 222 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 XRCC1P18887 633 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 KRT4P19013 534 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 DUSP3P51452 185 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 SP140Q13342 867 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 GBX1Q14549 363 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 RPE65Q16518 533 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 ZNF658BQ4V348 819 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 HSP90B2PQ58FF3 399 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 PPM1JQ5JR12 505 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 UBE2R2Q712K3 238 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 PIWIL4Q7Z3Z4 852 aaKnown RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 VRK3Q8IV63 474 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 SRRM1Q8IYB3 904 aaKnown RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 TBC1D21Q8IYX1 336 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 CYP4X1Q8N118 509 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 ARL10Q8N8L6 244 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 OR6C4Q8NGE1 309 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 INSM2Q96T92 566 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 POT1Q9NUX5 634 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 EURLQ9NYK6 297 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.46■□□□□ 0.23
CCM2-205ENST00000472223 WDR37Q9Y2I8 494 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 ST14Q9Y5Y6 855 aa16.46■□□□□ 0.23
CCM2-205ENST00000472223 VPS13AQ96RL7 3174 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 A0A1W2PPM1 405 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 PRR19A6NJB7 356 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 OR52A4PA6NMU1 304 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 RHPN2P1A8MT19 583 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 MAP2K7O14733 419 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 GLRA3O75311 464 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 MATN4O95460 622 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 S100BP04271 92 aaPredicted RBP16.45■□□□□ 0.22
CCM2-205ENST00000472223 RBP1P09455 135 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 MAGEA12P43365 314 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
CCM2-205ENST00000472223 DAB2P98082 770 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 CLCA4Q14CN2 919 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 ACAP2Q15057 778 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 NR0B2Q15466 257 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 C14orf28Q4W4Y0 310 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 OGFOD3Q6PK18 319 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 ADAMTSL2Q86TH1 951 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 TRABD2AQ86V40 505 aa16.45■□□□□ 0.22
CCM2-205ENST00000472223 SFRP1Q8N474 314 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms