RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 NCCRP1Q6ZVX7 275 aaPredicted RBP9.88□□□□□ -0.83
CDHR3-209ENST00000472116 ARHGAP12Q8IWW6 846 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 KBTBD2Q8IY47 623 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 BEND7Q8N7W2 519 aaPredicted RBP9.88□□□□□ -0.83
CDHR3-209ENST00000472116 WFDC11Q8NEX6 87 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 LPCAT1Q8NF37 534 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 GDAP1Q8TB36 358 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 SLC20A1Q8WUM9 679 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 GPR137Q96N19 417 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 WDR24Q96S15 920 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 DHX35Q9H5Z1 703 aaKnown RBP9.88□□□□□ -0.83
CDHR3-209ENST00000472116 DHCR7Q9UBM7 475 aaKnown RBP9.88□□□□□ -0.83
CDHR3-209ENST00000472116 AP4E1Q9UPM8 1137 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 ZNF835Q9Y2P0 537 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 HS3ST3B1Q9Y662 390 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 COLEC10Q9Y6Z7 277 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 SNRNP200O75643 2136 aaKnown RBP9.88□□□□□ -0.83
CDHR3-209ENST00000472116 PHF3Q92576 2039 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 FAM237AA0A1B0GTK4 181 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 FAM237BA0A1B0GVD1 139 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 MAP2K7O14733 419 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 ZSCAN9O15535 394 aaPredicted RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 FZD6O60353 706 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 CNOT3O75175 753 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 MTX2O75431 263 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 PRAMEF1O95521 474 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 HPP00738 406 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 F10P00742 488 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 HOXD4P09016 255 aaPredicted RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 ST6GAL1P15907 406 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 MMP8P22894 467 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 PON1P27169 355 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 MSX1P28360 303 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 CDH6P55285 790 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 RPL26P61254 145 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 ALDH6A1Q02252 535 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 TLDC1Q6P9B6 456 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 WDR59Q6PJI9 974 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 RFX8Q6ZV50 586 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 ZNF547Q8IVP9 402 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 ATPAF2Q8N5M1 289 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 TRAM1L1Q8N609 369 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 OR4E2Q8NGC2 313 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 DENND1AQ8TEH3 1009 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 NELFBQ8WX92 580 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 FKBP10Q96AY3 582 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 MBD6Q96DN6 1003 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 C12orf66Q96MD2 445 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 NUP85Q9BW27 656 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 POLR1EQ9GZS1 481 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 CLEC4MQ9H2X3 399 aaPredicted RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 SRMSQ9H3Y6 488 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 KIR3DX1Q9H7L2 352 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 WDR54Q9H977 334 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 NT5MQ9NPB1 228 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 SLC24A2Q9UI40 661 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 HOOK1Q9UJC3 728 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 NXT1Q9UKK6 140 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 RPL26L1Q9UNX3 145 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 CHKBQ9Y259 395 aa9.87□□□□□ -0.83
CDHR3-209ENST00000472116 LUC7L2Q9Y383 392 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 CFAP20Q9Y6A4 193 aaKnown RBP9.87□□□□□ -0.83
CDHR3-209ENST00000472116 GTPBP10A4D1E9 387 aaKnown RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 NKX2-6A6NCS4 301 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 WFS1O76024 890 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 ZRANB2O95218 330 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 LY6G6DO95868 133 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 MMEP08473 750 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 ACPPP15309 386 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 ALAS2P22557 587 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 CES1P23141 567 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 PRDX3P30048 256 aaKnown RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 ZNF143P52747 638 aaPredicted RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 PMP22Q01453 160 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 VWA3BQ502W6 1294 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 PPP6R3Q5H9R7 873 aaPredicted RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 NAPRTQ6XQN6 538 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 CDHR3Q6ZTQ4 885 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 ZNF655Q8N720 491 aaPredicted RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 NPWQ8N729 165 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 MYRIPQ8NFW9 859 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 OR11G2Q8NGC1 345 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 DLG3Q92796 817 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 LYSMD1Q96S90 227 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 TDRD1Q9BXT4 1180 aaKnown RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 KLHL25Q9H0H3 589 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 LIME1Q9H400 295 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 DEF6Q9H4E7 631 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 ZNF160Q9HCG1 818 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 NLRC4Q9NPP4 1024 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 NPDC1Q9NQX5 325 aaPredicted RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 SAMSN1Q9NSI8 373 aaKnown RBP9.86□□□□□ -0.83
CDHR3-209ENST00000472116 CTNND2Q9UQB3 1225 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 TTLL3Q9Y4R7 772 aa9.86□□□□□ -0.83
CDHR3-209ENST00000472116 SCN2AQ99250 2005 aa9.85□□□□□ -0.83
CDHR3-209ENST00000472116 OR5H15A6NDH6 313 aa9.85□□□□□ -0.83
CDHR3-209ENST00000472116 NPIPA5E9PKD4 350 aa9.85□□□□□ -0.83
CDHR3-209ENST00000472116 TTI1O43156 1089 aa9.85□□□□□ -0.83
CDHR3-209ENST00000472116 CTAG2O75638 210 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms