RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CTAG2O75638 210 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 RASSF9O75901 435 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 HEXIM1O94992 359 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 ZRANB2O95218 330 aaKnown RBP eCLIP5.7□□□□□ -1.5
VARS-222ENST00000470953 JCHAINP01591 159 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ALPPP05187 535 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 EBLN1P0CF75 366 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 NELFEP18615 380 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 CCNCP24863 283 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 MSX1P28360 303 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CD86P42081 329 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 GPR1P46091 355 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ATP5OP48047 213 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 EPHA4P54764 986 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 RRADP55042 308 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 NKX6-1P78426 367 aaPredicted RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 CDK3Q00526 305 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 PPIDQ08752 370 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 KIF5AQ12840 1032 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 MYBPHQ13203 477 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 TUBB3Q13509 450 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ZNF169Q14929 603 aaPredicted RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 CNGA3Q16281 694 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 PYCR3Q53H96 274 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 TFDP3Q5H9I0 405 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 LRRC66Q68CR7 880 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 IYDQ6PHW0 289 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 PAMR1Q6UXH9 720 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 FAM92BQ6ZTR7 304 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 MARK2Q7KZI7 788 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 TECPR1Q7Z6L1 1165 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 MRGPREQ86SM8 312 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 TRIM74Q86UV6 250 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 VSIG1Q86XK7 387 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 SYCE1Q8N0S2 351 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 PGBD5Q8N414 524 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 UBL4BQ8N7F7 174 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 DNAAF3Q8N9W5 541 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CATSPER1Q8NEC5 780 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CCHCR1Q8TD31 782 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 LRRN4Q8WUT4 740 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 TFB1MQ8WVM0 346 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 P3H4Q92791 437 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 LRRC45Q96CN5 670 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 FAF2Q96CS3 445 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ECHDC3Q96DC8 303 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CNDP1Q96KN2 507 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CALR3Q96L12 384 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 AGAP3Q96P47 875 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 RNF157Q96PX1 679 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 OR2M4Q96R27 311 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 MLPHQ9BV36 600 aaPredicted RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 FSD1LQ9BXM9 530 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 TDRD1Q9BXT4 1180 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 CEP41Q9BYV8 373 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ADAM19Q9H013 955 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 GOLPH3Q9H4A6 298 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 PCDH9Q9HC56 1237 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 SARS2Q9NP81 518 aaKnown RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 DTLQ9NZJ0 730 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 PKD2L2Q9NZM6 624 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 KCNN3Q9UGI6 736 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 AMACRQ9UHK6 382 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ZNHIT2Q9UHR6 403 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ADGRE2Q9UHX3 823 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CHKBQ9Y259 395 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 HCFC1P51610 2035 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 RYR1P21817 5038 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 A0A0A6YYK5 440 aaPredicted RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 IGHV5-51A0A0C4DH38 117 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 CCDC66A2RUB6 948 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 CFAP69A5D8W1 941 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 GOLGA6L9A6NEM1 432 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 TRIM64A6NGJ6 449 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 TRIM64BA6NI03 449 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 PSMD11O00231 422 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 TRAFD1O14545 582 aaPredicted RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 DDX3YO15523 660 aaKnown RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 ALOX12BO75342 701 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 UNC5CO95185 931 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 ASMTLO95671 621 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 PYGLP06737 847 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 IVLP07476 585 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 ESRRAP11474 423 aaPredicted RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 ZNF30P17039 623 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 IL4RP24394 825 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 MST1P26927 711 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 CFPP27918 469 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 CDC25BP30305 580 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 OTX2P32243 289 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 ETV3P41162 512 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 NR2C2P49116 596 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 ARSEP51690 589 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 GSDMDP57764 484 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 RPL26P61254 145 aaKnown RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 IFI35P80217 286 aaPredicted RBP5.69□□□□□ -1.5
VARS-222ENST00000470953 KRTAP1-1Q07627 177 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 PEX6Q13608 980 aa5.69□□□□□ -1.5
VARS-222ENST00000470953 GALNT3Q14435 633 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms