RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	GSTA3	Q16772	222 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	UGT3A2	Q3SY77	523 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	C6orf163	Q5TEZ5	329 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	OGFOD2	Q6N063	350 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	ADGRG6	Q86SQ4	1221 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	RASGRP3	Q8IV61	690 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	SFTPA1	Q8IWL2	248 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	SYNPO	Q8N3V7	929 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	AADAT	Q8N5Z0	425 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.76	□□□□□ -0.69
SND1-208	ENST00000470463	OR2L2	Q8NH16	312 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	GANC	Q8TET4	914 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	FBXL8	Q96CD0	374 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	COX14	Q96I36	57 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	CCDC138	Q96M89	665 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	OR52B2	Q96RD2	323 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	RTKN	Q9BST9	563 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	C1QTNF2	Q9BXJ5	285 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	SLC29A3	Q9BZD2	475 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	SHCBP1L	Q9BZQ2	653 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.76	□□□□□ -0.69
SND1-208	ENST00000470463	IPPK	Q9H8X2	491 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.76	□□□□□ -0.69
SND1-208	ENST00000470463	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.76	□□□□□ -0.69
SND1-208	ENST00000470463	FBXL12	Q9NXK8	326 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	TRPS1	Q9UHF7	1281 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	IKZF3	Q9UKT9	509 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	CNOT6	Q9ULM6	557 aa	Known RBP	10.76	□□□□□ -0.69
SND1-208	ENST00000470463	PDE10A	Q9Y233	779 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	COQ6	Q9Y2Z9	468 aa		10.76	□□□□□ -0.69
SND1-208	ENST00000470463	TCF20	Q9UGU0	1960 aa	Known RBP	10.76	□□□□□ -0.69
SND1-208	ENST00000470463		A0A1W2PP55	124 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	MGAT4D	A6NG13	374 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	IGLON5	A6NGN9	336 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463		B2RBV5	119 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463		H3BM21	787 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463		H3BQ06	376 aa	Predicted RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	CHUK	O15111	745 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	INPP4B	O15327	924 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	CCNT2	O60583	730 aa	Known RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	UGDH	O60701	494 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	MTX2	O75431	263 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	SKAP2	O75563	359 aa	Predicted RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	GUCA1C	O95843	209 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	EGF	P01133	1207 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	SRF	P11831	508 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	HGF	P14210	728 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	IDO1	P14902	403 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	LBP	P18428	481 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	HMOX2	P30519	316 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	TRIM23	P36406	574 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	ARL1	P40616	181 aa	Predicted RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	WAS	P42768	502 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	MRPL19	P49406	292 aa	Known RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	AGTR2	P50052	363 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	METAP1	P53582	386 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	KLF10	Q13118	480 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	MAD2L1	Q13257	205 aa	Predicted RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	NAA25	Q14CX7	972 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	PHKG1	Q16816	387 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	GGTA1P	Q4G0N0	100 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	C2orf27A	Q580R0	203 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	GOLGA7	Q7Z5G4	137 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	MILR1	Q7Z6M3	343 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	TRAPPC5	Q8IUR0	188 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	DDIAS	Q8IXT1	998 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	C10orf67	Q8IYJ2	551 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	PELI3	Q8N2H9	469 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	DENND6B	Q8NEG7	585 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	TSPEAR	Q8WU66	669 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	CCDC97	Q96F63	343 aa	Predicted RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	SIPA1	Q96FS4	1042 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	TBC1D10A	Q9BXI6	508 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	TEX101	Q9BY14	249 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	ZNF385D	Q9H6B1	395 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	NOL11	Q9H8H0	719 aa	Known RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	ZBTB26	Q9HCK0	441 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	SLC40A1	Q9NP59	571 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	CD320	Q9NPF0	282 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	MRPL40	Q9NQ50	206 aa	Known RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	LIMD1	Q9UGP4	676 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	EIF2B4	Q9UI10	523 aa	Known RBP	10.75	□□□□□ -0.69
SND1-208	ENST00000470463	ADAMTS6	Q9UKP5	1117 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	FIS1	Q9Y3D6	152 aa		10.75	□□□□□ -0.69
SND1-208	ENST00000470463	TICRR	Q7Z2Z1	1910 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	DYTN	A2CJ06	578 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	ZNF839	A8K0R7	811 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	SLC28A1	O00337	649 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TOR1B	O14657	336 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	KMO	O15229	486 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TAPBP	O15533	448 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	RASSF9	O75901	435 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	KRT6A	P02538	564 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	KRT6B	P04259	564 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	KRT16	P08779	473 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	HOXC4	P09017	264 aa	Predicted RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	COX4I1	P13073	169 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	HSD17B2	P37059	387 aa		10.74	□□□□□ -0.69

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