RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TBC1D10AQ9BXI6 508 aa17.75■□□□□ 0.43
SMC4-211ENST00000469858 IPPKQ9H8X2 491 aa17.75■□□□□ 0.43
SMC4-211ENST00000469858 SLC40A1Q9NP59 571 aa17.75■□□□□ 0.43
SMC4-211ENST00000469858 MBNL1Q9NR56 388 aaKnown RBP17.75■□□□□ 0.43
SMC4-211ENST00000469858 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.75■□□□□ 0.434e-98■■■■■ 943.1
SMC4-211ENST00000469858 GULP1Q9UBP9 304 aa17.75■□□□□ 0.43
SMC4-211ENST00000469858 STK38LQ9Y2H1 464 aa17.75■□□□□ 0.43
SMC4-211ENST00000469858 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 OR7A17O14581 309 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 GSTM1P09488 218 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 UROSP10746 265 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 PKNOX1P55347 436 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 ERVPABLB-1P60509 514 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 RPS21P63220 83 aaKnown RBP17.74■□□□□ 0.43
SMC4-211ENST00000469858 CDKL1Q00532 357 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 GSTM4Q03013 218 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 IRF4Q15306 451 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 PLA2G4EQ3MJ16 856 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 LETMD1Q6P1Q0 360 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 ZNF547Q8IVP9 402 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 CFAP206Q8IYR0 622 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 CDYL2Q8N8U2 506 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 MCOLN3Q8TDD5 553 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 FAM131CQ96AQ9 280 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 ZNF514Q96K75 400 aaPredicted RBP17.74■□□□□ 0.43
SMC4-211ENST00000469858 BTBD10Q9BSF8 475 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 LGR4Q9BXB1 951 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 TUBB1Q9H4B7 451 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 ZNF385DQ9H6B1 395 aa17.74■□□□□ 0.43
SMC4-211ENST00000469858 A0A1W2PQU0 124 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 SHISA7A6NL88 538 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 B2RBV5 119 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 K7EPI3 171 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 GYG2O15488 501 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 MATN4O95460 622 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 LINC00032P0C843 101 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 GLULP15104 373 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 PDHA2P29803 388 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 CCNG1P51959 295 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 SGCGQ13326 291 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 INPP5AQ14642 412 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 AGERQ15109 404 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 CDKL4Q5MAI5 379 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 FAM124AQ86V42 546 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 SLC22A15Q8IZD6 547 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 FOXJ1Q92949 421 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 MIPEPQ99797 713 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 KLC4Q9NSK0 619 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 TAS2R1Q9NYW7 299 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 PRKAB1Q9Y478 270 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 COPG1Q9Y678 874 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 H3BM21 787 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 RNGTTO60942 597 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 KATNA1O75449 491 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 STK16O75716 305 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 CHEK2O96017 543 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 OTCP00480 354 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 MAP4P27816 1152 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 CCINQ13939 588 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 NAA25Q14CX7 972 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 SMAD2Q15796 467 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 FBXO43Q4G163 708 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 ZNF658BQ4V348 819 aaPredicted RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 SLC44A4Q53GD3 710 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 EOGTQ5NDL2 527 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 KIAA1161Q6NSJ0 714 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 KIAA1324Q6UXG2 1013 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 TMEM92Q6UXU6 159 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 LARP4Q71RC2 724 aaKnown RBP eCLIP17.73■□□□□ 0.431e-17■■■■□ 24.2
SMC4-211ENST00000469858 Q7L0L9 218 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 CPSF7Q8N684 471 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 TP53I13Q8NBR0 393 aaPredicted RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 OR4F6Q8NGB9 312 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 FBXO27Q8NI29 283 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 HLA-CQ95604 372 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 UTP4Q969X6 686 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 CMTM5Q96DZ9 223 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 MRGPRX1Q96LB2 322 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 RAB3IPQ96QF0 476 aaPredicted RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 NUSAP1Q9BXS6 441 aaKnown RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 SCML1Q9UN30 329 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 OR1A2Q9Y585 309 aa17.73■□□□□ 0.43
SMC4-211ENST00000469858 PCYT1BQ9Y5K3 369 aaPredicted RBP17.73■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3DA0A087WVF3 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3IA0A087WXS9 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3EA0A087X179 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3KA0A087X1G2 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 LOC100653049A0A140TA62 436 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3FA6NER0 549 aaPredicted RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 ARHGEF33A8MVX0 844 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 MEI4A8MW99 385 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3LB9A6J9 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 LIN7AO14910 233 aaPredicted RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 PSIP1O75475 530 aaKnown RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 POP7O75817 140 aaKnown RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 KRT34O76011 436 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3HP0C7X1 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 ACADMP11310 421 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms