RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 A0A0G2JNG1 304 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 DCDC2BA2VCK2 349 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 KRT87PA6NCN2 255 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 KIR2DS3K7RE56 304 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 SLC30A4O14863 429 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 KPNA5O15131 536 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 ERLIN1O75477 346 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 LDOC1O95751 146 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 ALDOAP04075 364 aaKnown RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 MTHFD1P11586 935 aaKnown RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 ZNF37AP17032 561 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 XRCC1P18887 633 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 HALP42357 657 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 KIR2DS5Q14953 304 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 PERM1Q5SV97 790 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 CYHR1Q6ZMK1 362 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 OR5AR1Q8NGP9 310 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 CFAP61Q8NHU2 1237 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 MAPK15Q8TD08 544 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 JPH3Q8WXH2 748 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 LINGO1Q96FE5 620 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 RTKNQ9BST9 563 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 UNKQ9C0B0 810 aaKnown RBP14.43□□□□□ -0.1
COL9A3-209ENST00000469852 SNX15Q9NRS6 342 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 EURLQ9NYK6 297 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 KLHL42Q9P2K6 505 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 CPNE7Q9UBL6 633 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 FTSJ1Q9UET6 329 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 FETUBQ9UGM5 382 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 TBK1Q9UHD2 729 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 SLC24A2Q9UI40 661 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 PADI4Q9UM07 663 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 RP1P56715 2156 aa14.43□□□□□ -0.1
COL9A3-209ENST00000469852 CPED1A4D0V7 1026 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 TRIM49D1C9J1S8 452 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 SLC35E2BP0CK96 405 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 TPBGLP0DKB5 382 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 CKMT1AP12532 417 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 H2AFXP16104 143 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 ATP5DP30049 168 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 SKIV2L2P42285 1042 aaKnown RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 BDKRB1P46663 353 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 SERPINB9P50453 376 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 RAB10P61026 200 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 IRF9Q00978 393 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 PLOD1Q02809 727 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 HHEXQ03014 270 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 NR0B2Q15466 257 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 TTLL9Q3SXZ7 439 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 CCSMST1Q4G0I0 132 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 PPM1JQ5JR12 505 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 UGT3A1Q6NUS8 523 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 FBXO38Q6PIJ6 1188 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 CYP4X1Q8N118 509 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 SPATA6LQ8N4H0 392 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 MZB1Q8WU39 189 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 SKA2Q8WVK7 121 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 HNRNPLLQ8WVV9 542 aaKnown RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 TFGQ92734 400 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 CCDC74AQ96AQ1 378 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 CXorf40BQ96DE9 158 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 GPAMQ9HCL2 828 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 LRIT1Q9P2V4 623 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 PSMC3IPQ9P2W1 217 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-209ENST00000469852 CIDEBQ9UHD4 219 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 IKBKGQ9Y6K9 419 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 PCNX2A6NKB5 2137 aa14.42□□□□□ -0.1
COL9A3-209ENST00000469852 KMT2BQ9UMN6 2715 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-209ENST00000469852 EME2A4GXA9 379 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-209ENST00000469852 OR5K4A6NMS3 321 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 IFRD1O00458 451 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-209ENST00000469852 GIPC1O14908 333 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 TCEA3O75764 348 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 MATN4O95460 622 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 MPC1LP0DKB6 136 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 SLC2A4P14672 509 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 STMN1P16949 149 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 CKMT2P17540 419 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 MAGEA12P43365 314 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 FASLGP48023 281 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 SLC12A2P55011 1212 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 DAB2P98082 770 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 DLG1Q12959 904 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 PRKG2Q13237 762 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 GPR18Q14330 331 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 EFL1Q7Z2Z2 1120 aaKnown RBP14.41□□□□□ -0.1
COL9A3-209ENST00000469852 SLC9B2Q86UD5 537 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 RASGRP3Q8IV61 690 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 TRIM48Q8IWZ4 208 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 DLG3Q92796 817 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 ISL2Q96A47 359 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 TSPAN17Q96FV3 270 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 ZIM3Q96PE6 472 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 FERD3LQ96RJ6 166 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 CCDC77Q9BR77 488 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 HGH1Q9BTY7 390 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 POPDC3Q9HBV1 291 aa14.41□□□□□ -0.1
COL9A3-209ENST00000469852 SLC40A1Q9NP59 571 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms