RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 OR8H3Q8N146 312 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ARL14EPQ8N8R7 260 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 OR8H1Q8NGG4 311 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ST8SIA4Q92187 359 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 SYNDIG1Q9H7V2 258 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 POPDC2Q9HBU9 364 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 MARCH2Q9P0N8 246 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 MAGED1Q9Y5V3 778 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 PTPRFP10586 1907 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 A0A0U1RQS6 177 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 STK25O00506 426 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 PPM1BO75688 479 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 CKMT2P17540 419 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 XRCC1P18887 633 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 POU3F3P20264 500 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 KDELR1P24390 212 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 GABRR2P28476 465 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 FPGSQ05932 587 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ZNF252P-AS1Q0IIN9 211 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 MTX3Q5HYI7 312 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 LRRC73Q5JTD7 316 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 FCRLBQ6BAA4 426 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 CYB5R2Q6BCY4 276 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 TRNP1Q6NT89 227 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 TDRD5Q8NAT2 981 aaKnown RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 DEDD2Q8WXF8 326 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 NELL2Q99435 816 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 FTHL17Q9BXU8 183 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 BCO2Q9BYV7 579 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 TM6SF2Q9BZW4 377 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ROGDIQ9GZN7 287 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ABCG8Q9H221 673 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 NMUR1Q9HB89 426 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 PSMC3IPQ9P2W1 217 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 PTBP2Q9UKA9 531 aaKnown RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 RLFQ13129 1914 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 TRBV23-1A0A0A0MS06 115 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 OR6C70A6NIJ9 312 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 HTRA2O43464 458 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 POP4O95707 220 aaKnown RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 FABP1P07148 127 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 CYP2A7P20853 494 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 GTF2E2P29084 291 aaKnown RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 POU3F4P49335 361 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 RAB14P61106 215 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 PAGE2Q7Z2X7 111 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 TAC4Q86UU9 113 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 PHF13Q86YI8 300 aaPredicted RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 COLGALT2Q8IYK4 626 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ZDHHC14Q8IZN3 488 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ZNF285Q96NJ3 590 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 FYTTD1Q96QD9 318 aaKnown RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 MECRQ9BV79 373 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 ELOVL6Q9H5J4 265 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 DNAJC11Q9NVH1 559 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 HCFC1R1Q9NWW0 138 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 HPF1Q9NWY4 346 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 PCDHGA9Q9Y5G4 932 aaKnown RBP9.79□□□□□ -0.84
NUP50-214ENST00000469163 SPEGQ15772 3267 aa9.79□□□□□ -0.84
NUP50-214ENST00000469163 RTCAO00442 366 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 AP3D1O14617 1153 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 LSM8O95777 96 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 IL7P13232 177 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 CSKP41240 450 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 NUDT2P50583 147 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 DGKQP52824 942 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 CAPZA1P52907 286 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SLC18A1P54219 525 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 LTB4RQ15722 352 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 STXBP5Q5T5C0 1151 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 TMEM236Q5W0B7 351 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 STEAP3Q658P3 488 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RETSATQ6NUM9 610 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 C11orf63Q6NUN7 778 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 LYSMD2Q8IV50 215 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 CCDC117Q8IWD4 279 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 CMTM5Q96DZ9 223 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 NAT9Q9BTE0 207 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 CRISPLD1Q9H336 500 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 EHD3Q9NZN3 535 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 MBD2Q9UBB5 411 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 GVINP1Q7Z2Y8 2422 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 C17orf113A0A1B0GUU1 675 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SGCEO43556 437 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 BCAS1O75363 584 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 HDCP19113 662 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 ZNF143P52747 638 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 POU5F1BQ06416 359 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 DSG2Q14126 1118 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 DMC1Q14565 340 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 CLCA4Q14CN2 919 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 FRMD7Q6ZUT3 714 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RTL10Q7L3V2 364 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RCOR2Q8IZ40 523 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 PPM1NQ8N819 430 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms