RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C2CD2Q9Y426 696 aa4.89□□□□□ -1.63
XRN1-207ENST00000468894 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.89□□□□□ -1.63
XRN1-207ENST00000468894 ZNF541Q9H0D2 1346 aa4.89□□□□□ -1.63
XRN1-207ENST00000468894 KIAA1210Q9ULL0 1709 aa4.89□□□□□ -1.63
XRN1-207ENST00000468894 GLOD5A6NK44 160 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 A6NL46 340 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 A8MV72 311 aaPredicted RBP4.88□□□□□ -1.63
XRN1-207ENST00000468894 CLIC2O15247 247 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 PRAMEF11O60813 436 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 CAVIN2O95810 425 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 SAT1P21673 171 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 CDK3Q00526 305 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 CORO6Q6QEF8 472 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 NOTCH2NLQ7Z3S9 236 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 CEP57L1Q8IYX8 460 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 GUF1Q8N442 669 aaKnown RBP4.88□□□□□ -1.63
XRN1-207ENST00000468894 MINDY1Q8N5J2 469 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 ZBTB8BQ8NAP8 495 aaPredicted RBP4.88□□□□□ -1.63
XRN1-207ENST00000468894 TMEM190Q8WZ59 177 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 LPGAT1Q92604 370 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 ZNF622Q969S3 477 aaKnown RBP eCLIP4.88□□□□□ -1.63
XRN1-207ENST00000468894 JAKMIP2Q96AA8 810 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 SGK494Q96LW2 274 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 OLFM1Q99784 485 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 MMP27Q9H306 513 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 SNX8Q9Y5X2 465 aa4.88□□□□□ -1.63
XRN1-207ENST00000468894 LOC100509620A0A075B734 347 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 A0A1W2PRB8 838 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 FEZF1A0PJY2 475 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 PRR32B1ATL7 298 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 E9PI62 339 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 XRCC3O43542 346 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 BEST1O76090 585 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 GNB3P16520 340 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 CHRNB4P30926 498 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 CDH11P55287 796 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 NR1D2Q14995 579 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 CCDC6Q16204 474 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 C15orf59Q2T9L4 293 aaPredicted RBP4.87□□□□□ -1.63
XRN1-207ENST00000468894 KIAA1644Q3SXP7 199 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 CEP85LQ5SZL2 805 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 TMEM211Q6ICI0 200 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 WDSUB1Q8N9V3 476 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 OR1J1Q8NGS3 322 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 GRHL3Q8TE85 626 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 RNF128Q8TEB7 428 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 LRR1Q96L50 414 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 RTP3Q9BQQ7 232 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 TRAF4Q9BUZ4 470 aaPredicted RBP4.87□□□□□ -1.63
XRN1-207ENST00000468894 FNDC11Q9BVV2 318 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 ARRDC1-AS1Q9H2J1 176 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 MRPL15Q9P015 296 aaKnown RBP4.87□□□□□ -1.63
XRN1-207ENST00000468894 CHORDC1Q9UHD1 332 aaPredicted RBP4.87□□□□□ -1.63
XRN1-207ENST00000468894 OSGIN1Q9UJX0 560 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 KCNJ14Q9UNX9 436 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 RABGAP1Q9Y3P9 1069 aa4.87□□□□□ -1.63
XRN1-207ENST00000468894 DNM1LO00429 736 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 MED24O75448 989 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 TOMM70O94826 608 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 NADKO95544 446 aaPredicted RBP4.86□□□□□ -1.63
XRN1-207ENST00000468894 FRMD6-AS1P0C7T7 363 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 ITGA3P26006 1051 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 ALDH4A1P30038 563 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 MAP2K2P36507 400 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 HSD17B4P51659 736 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 CX3CL1P78423 397 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 LGALS3BPQ08380 585 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 BAATQ14032 418 aaPredicted RBP4.86□□□□□ -1.63
XRN1-207ENST00000468894 CFAP161Q6P656 301 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 SH2D5Q6ZV89 423 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 DNAJC22Q8N4W6 341 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 MOSPD2Q8NHP6 518 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 CTCFLQ8NI51 663 aaPredicted RBP4.86□□□□□ -1.63
XRN1-207ENST00000468894 HSD17B8Q92506 261 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 ABHD1Q96SE0 405 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 MRPL1Q9BYD6 325 aaKnown RBP4.86□□□□□ -1.63
XRN1-207ENST00000468894 TBC1D17Q9HA65 648 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.86□□□□□ -1.63
XRN1-207ENST00000468894 ECHDC1Q9NTX5 307 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 TUBE1Q9UJT0 475 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 GRIP1Q9Y3R0 1128 aa4.86□□□□□ -1.63
XRN1-207ENST00000468894 HYKKA2RU49 373 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 ANKUB1A6NFN9 424 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 HHLA1C9JL84 531 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 GAPDHSO14556 408 aaPredicted RBP4.85□□□□□ -1.63
XRN1-207ENST00000468894 CLPTM1O96005 669 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 NGFP01138 241 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 GJA1P17302 382 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
XRN1-207ENST00000468894 DMPKQ09013 629 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 MDH1BQ5I0G3 518 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 DCAF10Q5QP82 559 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 TMPRSS11FQ6ZWK6 438 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 BRINP3Q76B58 766 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 ZNF554Q86TJ5 538 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 ZNF595Q8IYB9 648 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 TRIML1Q8N9V2 468 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 ZNF383Q8NA42 475 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 MCUQ8NE86 351 aa4.85□□□□□ -1.63
XRN1-207ENST00000468894 APPL2Q8NEU8 664 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms