RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 KLK10O43240 276 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 IFNB1P01574 187 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 RALBP11234 206 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 ETS1P14921 441 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 TPH1P17752 444 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 PSMA3P25788 255 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 RPL10P27635 214 aaKnown RBP14.17□□□□□ -0.14
COL27A1-203ENST00000468565 MC4RP32245 332 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 ETV5P41161 510 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 HALP42357 657 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 CDH17Q12864 832 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 SEMA5AQ13591 1074 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 CCDC38Q502W7 563 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 RNASEH2BQ5TBB1 312 aaKnown RBP14.17□□□□□ -0.14
COL27A1-203ENST00000468565 CENPUQ71F23 418 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 NXPE1Q8N323 547 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 GLIS1Q8NBF1 620 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 AGBL5Q8NDL9 886 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 DCUN1D1Q96GG9 259 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 CRELD1Q96HD1 420 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 DNAJC1Q96KC8 554 aaKnown RBP14.17□□□□□ -0.14
COL27A1-203ENST00000468565 LINC00615Q96LM1 132 aaPredicted RBP14.17□□□□□ -0.14
COL27A1-203ENST00000468565 PAK5Q9P286 719 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 RALYQ9UKM9 306 aaKnown RBP14.17□□□□□ -0.14
COL27A1-203ENST00000468565 SLC30A1Q9Y6M5 507 aa14.17□□□□□ -0.14
COL27A1-203ENST00000468565 TRBV5-4A0A0C4DH59 114 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 MGAT4DA6NG13 374 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 SMAPO00193 183 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 CD82P27701 267 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 CSTF2P33240 577 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL27A1-203ENST00000468565 PPM1FP49593 454 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-203ENST00000468565 POU6F1Q14863 301 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 FNBP1LQ5T0N5 605 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 TMEM164Q5U3C3 297 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 TAB3Q8N5C8 712 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-203ENST00000468565 SGF29Q96ES7 293 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 SEC16BQ96JE7 1060 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 COPS8Q99627 209 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 TBC1D10AQ9BXI6 508 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 PHACTR1Q9C0D0 580 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 NSRP1Q9H0G5 558 aaKnown RBP14.16□□□□□ -0.14
COL27A1-203ENST00000468565 WDR37Q9Y2I8 494 aa14.16□□□□□ -0.14
COL27A1-203ENST00000468565 MN1Q10571 1320 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-203ENST00000468565 MROH6A6NGR9 719 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CFAP99D6REC4 459 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 MPSTP25325 297 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 MAPK10P53779 464 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 TMPRSS3P57727 454 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 LAMB3Q13751 1172 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 SEPT6Q14141 434 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 NFE2L1Q14494 772 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CLCA4Q14CN2 919 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 METRNLQ641Q3 311 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 C4orf22Q6V702 233 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 FAM83HQ6ZRV2 1179 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-203ENST00000468565 DET1Q7L5Y6 550 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 ARHGAP22Q7Z5H3 698 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PPIL6Q8IXY8 311 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 OR52K1Q8NGK4 314 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 OR2L2Q8NH16 312 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 DYDC1Q8WWB3 177 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 NCSTNQ92542 709 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 USP7Q93009 1102 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CXorf40BQ96DE9 158 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CDKN2AIPNLQ96HQ2 116 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CABS1Q96KC9 395 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 ZNF317Q96PQ6 595 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PPCSQ9HAB8 311 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 SLC40A1Q9NP59 571 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 RAB6BQ9NRW1 208 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PIH1D1Q9NWS0 290 aaKnown RBP14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 IGLV3-16A0A075B6K0 115 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PRAMEF33A0A0G2JMD5 474 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 OR52A4PA6NMU1 304 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 C9orf172C9J069 976 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 SGTAO43765 313 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PRAMEF10O60809 474 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 UBXN7O94888 489 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 C9P02748 559 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CCL4P13236 92 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 ACRV1P26436 265 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 MAPK9P45984 424 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PRLHRP49683 370 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CLN3Q13286 438 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 RNF187Q5TA31 235 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-203ENST00000468565 C6orf89Q6UWU4 347 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 PLXDC1Q8IUK5 500 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 BEND7Q8N7W2 519 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-203ENST00000468565 DNAAF3Q8N9W5 541 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 FCRL3Q96P31 734 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-203ENST00000468565 TAAR9Q96RI9 348 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 RANBP9Q96S59 729 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 FAM96AQ9H5X1 160 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 ZDHHC3Q9NYG2 299 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 ACSL5Q9ULC5 683 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 RIMKLBQ9ULI2 386 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 ACTL7BQ9Y614 415 aa14.15□□□□□ -0.14
COL27A1-203ENST00000468565 CACNA1GO43497 2377 aa14.14□□□□□ -0.15
COL27A1-203ENST00000468565 EXOC1LA0A1B0GW35 172 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms