RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 KLHL42Q9P2K6 505 aa13.28□□□□□ -0.28
SSBP1-206ENST00000467681 SLC24A2Q9UI40 661 aa13.28□□□□□ -0.28
SSBP1-206ENST00000467681 COMMD10Q9Y6G5 202 aa13.28□□□□□ -0.28
SSBP1-206ENST00000467681 IGHV5-10-1A0A0J9YXX1 117 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 DUX1O43812 170 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 PROS1P07225 676 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 GSTA2P09210 222 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 TYRP1P17643 537 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 CSF2RBP32927 897 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 MAGEA4P43358 317 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 LIMK2P53671 638 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 CSE1LP55060 971 aaKnown RBP13.27□□□□□ -0.29
SSBP1-206ENST00000467681 ABRQ12979 859 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 TRA2AQ13595 282 aaKnown RBP eCLIP13.27□□□□□ -0.29
SSBP1-206ENST00000467681 SYTL3Q4VX76 610 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 PLEKHS1Q5SXH7 462 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 DUS1LQ6P1R4 473 aaKnown RBP13.27□□□□□ -0.29
SSBP1-206ENST00000467681 C3orf62Q6ZUJ4 267 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 OTOAQ7RTW8 1153 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 STRADBQ9C0K7 418 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 GALPQ9UBC7 116 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 EPHA6Q9UF33 1036 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 MED16Q9Y2X0 877 aa13.27□□□□□ -0.29
SSBP1-206ENST00000467681 A0A1W2PNU3 283 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-206ENST00000467681 SSTR1P30872 391 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 MAPK9P45984 424 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 LSSP48449 732 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 PPM1FP49593 454 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-206ENST00000467681 CLCN7P51798 805 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 GBX1Q14549 363 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 MAP9Q49MG5 647 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 KLHL35Q6PF15 583 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 PLXDC1Q8IUK5 500 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 TBC1D21Q8IYX1 336 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 OR4E2Q8NGC2 313 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 IFT81Q8WYA0 676 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 INPP5DQ92835 1189 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 LIN37Q96GY3 246 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-206ENST00000467681 C9orf72Q96LT7 481 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 AARSD1Q9BTE6 412 aaKnown RBP13.26□□□□□ -0.29
SSBP1-206ENST00000467681 RAB33BQ9H082 229 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 CCDC68Q9H2F9 335 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 TFB2MQ9H5Q4 396 aaKnown RBP13.26□□□□□ -0.29
SSBP1-206ENST00000467681 TMEM9Q9P0T7 183 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 DHRS7Q9Y394 339 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
SSBP1-206ENST00000467681 CCDC187A0A096LP49 1063 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 ESPNB1AK53 854 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 E5RI56 91 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 C9P02748 559 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 CAPNS1P04632 268 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 MPSTP25325 297 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 ATP5DP30049 168 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 SKIV2L2P42285 1042 aaKnown RBP13.25□□□□□ -0.29
SSBP1-206ENST00000467681 GPX6P59796 221 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
SSBP1-206ENST00000467681 PRKG2Q13237 762 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 EIF3IQ13347 325 aaKnown RBP13.25□□□□□ -0.29
SSBP1-206ENST00000467681 PHF19Q5T6S3 580 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 ARHGAP22Q7Z5H3 698 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 ZBTB2Q8N680 514 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 OR5AR1Q8NGP9 310 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 WDR36Q8NI36 951 aaKnown RBP13.25□□□□□ -0.29
SSBP1-206ENST00000467681 LCN9Q8WX39 176 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 JPH3Q8WXH2 748 aaPredicted RBP13.25□□□□□ -0.29
SSBP1-206ENST00000467681 KCNJ9Q92806 393 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 FAM136AQ96C01 138 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 ZDHHC12Q96GR4 267 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 CCDC74BQ96LY2 380 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 TSPYL1Q9H0U9 437 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 TRIT1Q9H3H1 467 aaKnown RBP13.25□□□□□ -0.29
SSBP1-206ENST00000467681 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 LRRC4CQ9HCJ2 640 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 SLC17A6Q9P2U8 582 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 POLG2Q9UHN1 485 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 SEC16AO15027 2179 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
SSBP1-206ENST00000467681 C1QTNF9BB2RNN3 333 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 HGSO14964 777 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-206ENST00000467681 CAPN5O15484 640 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-206ENST00000467681 MPOP05164 745 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 C1QTNF9P0C862 333 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 TPBGLP0DKB5 382 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 THRAP10827 490 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 CD9P21926 228 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 CYP4F3Q08477 520 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 CUL1Q13616 776 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 C16orf72Q14CZ0 275 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 ACSBG2Q5FVE4 666 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 DNTTIP2Q5QJE6 756 aaKnown RBP13.24□□□□□ -0.29
SSBP1-206ENST00000467681 UNC5DQ6UXZ4 953 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 CAPN12Q6ZSI9 719 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 CEP128Q6ZU80 1094 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 RAB11FIP2Q7L804 512 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 RELL1Q8IUW5 271 aa13.24□□□□□ -0.29
SSBP1-206ENST00000467681 IFT20Q8IY31 132 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms