RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C15orf41Q9Y2V0 281 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 CPSF4LA6NMK7 179 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 BTNL10A8MVZ5 291 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 CCNCP24863 283 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ECHS1P30084 290 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ARL3P36405 182 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 CBX3Q13185 183 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 DGLUCYQ7Z3D6 616 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 DBF4BQ8NFT6 615 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 LGR4Q9BXB1 951 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 MAGEH1Q9H213 219 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 IPPKQ9H8X2 491 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TRPV5Q9NQA5 729 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 DNAJC28Q9NX36 388 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 BCKDKO14874 412 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 MFSD11O43934 449 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 IPO13O94829 963 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 HSD11B1P28845 292 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TNFRSF8P28908 595 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 NDST2P52849 883 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 YBEYP58557 167 aaPredicted RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 ARSHQ5FYA8 562 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 CIR1Q86X95 450 aaPredicted RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 XYLT1Q86Y38 959 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ART5Q96L15 291 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 LRMDAQ9H2I8 198 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 MUC13Q9H3R2 512 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 CLK4Q9HAZ1 481 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 PNPOQ9NVS9 261 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ATXN10Q9UBB4 475 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 MAN2B2Q9Y2E5 1009 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 HSPA7P48741 367 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ARHGAP1Q07960 439 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 PDK4Q16654 411 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 EOGTQ5NDL2 527 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 SLC9A9Q8IVB4 645 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 GPR65Q8IYL9 337 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 SETD7Q8WTS6 366 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 MKKSQ9NPJ1 570 aaPredicted RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 RSL24D1Q9UHA3 163 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 RGPD1P0DJD0 1748 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ELOA3DA6NLF2 546 aaPredicted RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 SLC30A4O14863 429 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 AKAP8O43823 692 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 KLRC4O43908 158 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TGDSO95455 350 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ALOX5P09917 674 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TPSB2P20231 275 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 NDUFS1P28331 727 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TAS2R40P59535 323 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TPSAB1Q15661 275 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ELOA3BQ3SY89 546 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 UBAP2Q5T6F2 1119 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 ECHDC2Q86YB7 292 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ELOA3Q8NG57 546 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 GPR151Q8TDV0 419 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 FUCA2Q9BTY2 467 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 WDR12Q9GZL7 423 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 GPR88Q9GZN0 384 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 C11orf16Q9NQ32 467 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 FARSBQ9NSD9 589 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 CLCA3PQ9Y6N3 262 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ELOVL7A1L3X0 281 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 NRP2O60462 931 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 MT-CYBP00156 380 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 MPSTP25325 297 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 HSD17B2P37059 387 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 HCAR3P49019 387 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 C1QTNF8P60827 252 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 RPL7AP62424 266 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 RIN1Q13671 783 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 KLHL26Q53HC5 615 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 MTX3Q5HYI7 312 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 GLYATQ6IB77 296 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 DNAJA4Q8WW22 397 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 PNPLA2Q96AD5 504 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CCDC115Q96NT0 180 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CSPG4P5Q96PW8 444 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 GPATCH1Q9BRR8 931 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 TBL1XR1Q9BZK7 514 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 PNPLA8Q9NP80 782 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 C8orf4Q9NR00 106 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 IRS2Q9Y4H2 1338 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 BTAF1O14981 1849 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ENPP3O14638 875 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 AHCYL1O43865 530 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 THRBP10828 461 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 COL6A2P12110 1019 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 NR1H2P55055 460 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 GJA9P57773 515 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CHIT1Q13231 466 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
HPS4-209ENST00000466781 CMC1Q7Z7K0 106 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SLC30A8Q8IWU4 369 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms