RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TIAL1Q01085 375 aaKnown RBP eCLIP14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 INSM1Q01101 510 aaPredicted RBP14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 ILF2Q12905 390 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 ABRQ12979 859 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 GPR18Q14330 331 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 EFTUD2Q15029 972 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■■□ 20.1
DNMT3A-208ENST00000466601 ERCC6LQ2NKX8 1250 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 ACSBG2Q5FVE4 666 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 GRTP1Q5TC63 336 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 GIMAP7Q8NHV1 300 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 WDR48Q8TAF3 677 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 CD200R1Q8TD46 325 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 CYTH2Q99418 400 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 MCMBPQ9BTE3 642 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 TBC1D10AQ9BXI6 508 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 TXLNGYQ9BZA5 131 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 MVB12BQ9H7P6 319 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 TRMT6Q9UJA5 497 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 ASF1AQ9Y294 204 aa14.1□□□□□ -0.15
DNMT3A-208ENST00000466601 ASXL3Q9C0F0 2248 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 IGHV1OR21-1A0A087WYE8 117 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 FAM95CA0A1B0GW59 222 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 NTN3O00634 580 aaPredicted RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 CD9P21926 228 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 ATP5DP30049 168 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 PPM1FP49593 454 aaPredicted RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 EPHA4P54764 986 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 GPLD1P80108 840 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 SPIDRQ14159 915 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 AMZ1Q400G9 498 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 WDR93Q6P2C0 686 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 RAB44Q7Z6P3 723 aaPredicted RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 SPNS2Q8IVW8 549 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 TBC1D21Q8IYX1 336 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 CHCHD4Q8N4Q1 142 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 OR10G6Q8NH81 332 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 CFAP61Q8NHU2 1237 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 UHMK1Q8TAS1 419 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 SKA2Q8WVK7 121 aaPredicted RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 AHCYL2Q96HN2 611 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 VPS39Q96JC1 886 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 GFM1Q96RP9 751 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 RBBP8Q99708 897 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 ACSS3Q9H6R3 686 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 KIR3DX1Q9H7L2 352 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 SLC24A2Q9UI40 661 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 TSR3Q9UJK0 312 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 CNOT1A5YKK6 2376 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 RP1P56715 2156 aa14.09□□□□□ -0.15
DNMT3A-208ENST00000466601 A0A087WUV0 522 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 RIPK2O43353 540 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 FAM155BO75949 473 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 MT-CO3P00414 261 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 CBSLP0DN79 551 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 ENO3P13929 434 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 AMD1P17707 334 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 SAT1P21673 171 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 FDXRP22570 491 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 MCM3P25205 808 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 CD1CP29017 333 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 SPRP35270 261 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 CBSP35520 551 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 MAPK9P45984 424 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 LIMK2P53671 638 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 CLDN6P56747 220 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 FOXC1Q12948 553 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 PRKG2Q13237 762 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 PLCL1Q15111 1095 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 KLHL38Q2WGJ6 581 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 HES3Q5TGS1 186 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 CDCP2Q5VXM1 449 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 NKAIN2Q5VXU1 208 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 PAQR3Q6TCH7 311 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 UNC5DQ6UXZ4 953 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 NEK10Q6ZWH5 1172 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 USP53Q70EK8 1073 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 PIM3Q86V86 326 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 TMPRSS12Q86WS5 348 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 CPNE9Q8IYJ1 553 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 ACVR1CQ8NER5 493 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 OR5AR1Q8NGP9 310 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 OR5K2Q8NHB8 316 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 JPH3Q8WXH2 748 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 MRRFQ96E11 262 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 FOPNLQ96NB1 174 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 OLFM1Q99784 485 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 HGH1Q9BTY7 390 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 TRIT1Q9H3H1 467 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 EPB41L1Q9H4G0 881 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 POLG2Q9UHN1 485 aa14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 ATXN7L1Q9ULK2 861 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 MTO1Q9Y2Z2 717 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-208ENST00000466601 EIF3FO00303 357 aaPredicted RBP14.07□□□□□ -0.16
DNMT3A-208ENST00000466601 DUX1O43812 170 aa14.07□□□□□ -0.16
DNMT3A-208ENST00000466601 TCEA3O75764 348 aa14.07□□□□□ -0.16
DNMT3A-208ENST00000466601 UBXN7O94888 489 aa14.07□□□□□ -0.16
DNMT3A-208ENST00000466601 MATN4O95460 622 aa14.07□□□□□ -0.16
DNMT3A-208ENST00000466601 CPNE6O95741 557 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms