RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 NIPA2Q8N8Q9 360 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 NAT8LQ8N9F0 302 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 TERB1Q8NA31 727 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 CEP70Q8NHQ1 597 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 RFWD2Q8NHY2 731 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SCAMP5Q8TAC9 235 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 ZNF420Q8TAQ5 688 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 GDAP1Q8TB36 358 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SLC35B2Q8TB61 432 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 ZCCHC10Q8TBK6 192 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 ZNF564Q8TBZ8 553 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 ACMSDQ8TDX5 336 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SH3RF3Q8TEJ3 882 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 FNIP1Q8TF40 1166 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 PYROXD1Q8WU10 500 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 CHPT1Q8WUD6 406 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 DCAKDQ8WVC6 231 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 C17orf50Q8WW18 174 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SLC44A1Q8WWI5 657 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 STMN2Q93045 179 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 TOP1MTQ969P6 601 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 MCUR1Q96AQ8 359 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 MTBPQ96DY7 904 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 FEM1CQ96JP0 617 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 CNDP1Q96KN2 507 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 ZNF641Q96N77 438 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 RANBP9Q96S59 729 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 PLIN2Q99541 437 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 PSD2Q9BQI7 771 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 FUZQ9BT04 418 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 NDC1Q9BTX1 674 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 HGH1Q9BTY7 390 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 TSSK1BQ9BXA7 367 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 MAK16Q9BXY0 300 aaKnown RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 YTHDF1Q9BYJ9 559 aaKnown RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 TINAGL1Q9GZM7 467 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 NMUR2Q9GZQ4 415 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 ENKD1Q9H0I2 346 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 WWP1Q9H0M0 922 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SLC6A15Q9H2J7 730 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SERHL2Q9H4I8 314 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 EBF3Q9H4W6 596 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 Q9H521 79 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 RETREG1Q9H6L5 497 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 TMEM206Q9H813 350 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 BARX1Q9HBU1 254 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 PCDH9Q9HC56 1237 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 C8orf4Q9NR00 106 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 AGPAT3Q9NRZ7 376 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 TBC1D23Q9NUY8 699 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 THAP1Q9NVV9 213 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SPATA7Q9P0W8 599 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 NFKBIL1Q9UBC1 381 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 LPAR3Q9UBY5 353 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 CDH22Q9UJ99 828 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 PRPF19Q9UMS4 504 aaKnown RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 CLCA2Q9UQC9 943 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 PLLPQ9Y342 182 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 SLC30A1Q9Y6M5 507 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 FNDC1Q4ZHG4 1894 aaPredicted RBP3.43□□□□□ -1.86
SORT1-202ENST00000466471 CLUHO75153 1309 aa3.43□□□□□ -1.86
SORT1-202ENST00000466471 MED13LQ71F56 2210 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 CABIN1Q9Y6J0 2220 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 A0A087WV48 116 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 CYP2D7A0A087X1C5 515 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 C15orf38-AP3S2A0A0A6YYH1 394 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 IQANK1A0A1B0GTG1 560 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 PRSS51A0A1B0GVH4 220 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 EXOC1LA0A1B0GW35 172 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 A0A1W2PRG0 241 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 TCRBV5S1A1TA0A578 114 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 FAM90A18PA6NE21 464 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 FAM90A16PA6NEW6 464 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 FAM90A9PA6NNJ1 464 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 FAM90A5PA8MXJ8 464 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 NUDT19A8MXV4 375 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 E9PMD0 336 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 ZNF195O14628 629 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 ZBTB5O15062 677 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 CLDN3O15551 220 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 DHHO43323 396 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 LIASO43766 372 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 PTP4A3O75365 173 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 SPAG7O75391 227 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 CIB2O75838 187 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 RSL1D1O76021 490 aaKnown RBP3.42□□□□□ -1.86
SORT1-202ENST00000466471 CSPG5O95196 566 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 CCNDBP1O95273 360 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 GSRP00390 522 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 CLEC3BP05452 202 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 ITGB1P05556 798 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 HNRNPCP07910 306 aaKnown RBP eCLIP3.42□□□□□ -1.86
SORT1-202ENST00000466471 HNRNPA1P09651 372 aaKnown RBP eCLIP3.42□□□□□ -1.86
SORT1-202ENST00000466471 ATXN1LP0C7T5 689 aaKnown RBP3.42□□□□□ -1.86
SORT1-202ENST00000466471 FAM90A15PP0C7V4 464 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 FAM90A14PP0C7W9 464 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 ZNF806P0C7X5 589 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 ZCCHC18P0CG32 403 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 TSPY3P0CV98 308 aa3.42□□□□□ -1.86
SORT1-202ENST00000466471 TSPY8P0CW00 308 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms