RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 WASH6PQ9NQA3 447 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 TREX1Q9NSU2 369 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 FOXJ2Q9P0K8 574 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ACSL5Q9ULC5 683 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 URB1O60287 2271 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 SNRNP200O75643 2136 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 ACACAQ13085 2346 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 CCDC188H7C350 402 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 QSOX1O00391 747 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 TTI1O43156 1089 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 KLK10O43240 276 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 KIF1CO43896 1103 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 AP2A2O94973 939 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 RHOXF2BP0C7M4 288 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PAMP19021 973 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PPARGP37231 505 aaPredicted RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PTGIRP43119 386 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 CAPZBP47756 277 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 DR1Q01658 176 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 FOXM1Q08050 763 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PRKG2Q13237 762 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PTK6Q13882 451 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 DHX34Q14147 1143 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 AARS2Q5JTZ9 985 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 LYPLAL1Q5VWZ2 237 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PTRHD1Q6GMV3 140 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 C8orf74Q6P047 294 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PACS1Q6VY07 963 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PLXDC1Q8IUK5 500 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PPIL6Q8IXY8 311 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 NAT8LQ8N9F0 302 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 AGBL5Q8NDL9 886 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 PHC3Q8NDX5 983 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 CFAP61Q8NHU2 1237 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 WNT2BQ93097 391 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 KRT12Q99456 494 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 NRTNQ99748 197 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 DPYSL5Q9BPU6 564 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 RHOXF2Q9BQY4 288 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 KIFC1Q9BW19 673 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 TSPYL1Q9H0U9 437 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 MRM3Q9HC36 420 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 APMAPQ9HDC9 416 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 CIDEBQ9UHD4 219 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 RIMKLBQ9ULI2 386 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 TDRKHQ9Y2W6 561 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 NEU2Q9Y3R4 380 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 RPS6KL1Q9Y6S9 549 aa9.5□□□□□ -0.89
RTFDC1-205ENST00000466260 APC2O95996 2303 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 C17orf113A0A1B0GUU1 675 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 GSAPA4D1B5 854 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CDRT15L2A8MXV6 281 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 C9orf172C9J069 976 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 HGSO14964 777 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 DXOO77932 396 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 FGF3P11487 239 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CD46P15529 392 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 POLR2CP19387 275 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 PSMA3P25788 255 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ARNTP27540 789 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 FMO4P31512 558 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 MAGEA6P43360 314 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 TTPAP49638 278 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ERVPABLB-1P60509 514 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 VSNL1P62760 191 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 HSPA14Q0VDF9 509 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 TRA2AQ13595 282 aaKnown RBP eCLIP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 THOC5Q13769 683 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 TGIF1Q15583 401 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CLPPQ16740 277 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 BBS9Q3SYG4 887 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 HP1BP3Q5SSJ5 553 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 RNASEH2BQ5TBB1 312 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CACHD1Q5VU97 1274 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ANKS6Q68DC2 871 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 KIAA0930Q6ICG6 404 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CAPRIN2Q6IMN6 1127 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ARMC6Q6NXE6 501 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 WDR74Q6RFH5 385 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CERS6Q6ZMG9 384 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 OOSP2Q86WS3 158 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ZFAND4Q86XD8 727 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 SPACA3Q8IXA5 215 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 RBM12BQ8IXT5 1001 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 SPATA4Q8NEY3 305 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 OR4E2Q8NGC2 313 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 OR52E1Q8NGJ3 308 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 OR5AR1Q8NGP9 310 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 SKA2Q8WVK7 121 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 TFGQ92734 400 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 PEX13Q92968 403 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 TMEM159Q96B96 161 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ELMO2Q96JJ3 720 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 C9orf72Q96LT7 481 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 PWWP2AQ96N64 755 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 FCRL3Q96P31 734 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms