RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CAPZA2P47755 286 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 CCR3P51677 355 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 PNRC1Q12796 327 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 AIMP1Q12904 312 aaKnown RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ALCAMQ13740 583 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 SNTB1Q13884 538 aaKnown RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 CRY2Q49AN0 593 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ERMARDQ5T6L9 678 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 GRTP1Q5TC63 336 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ZNF449Q6P9G9 518 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 TEX38Q6PEX7 206 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 TMEM173Q86WV6 379 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 SLC24A4Q8NFF2 622 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 DAZLQ92904 295 aaKnown RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ERP27Q96DN0 273 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ST6GAL2Q96JF0 529 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ABHD6Q9BV23 337 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 MMP28Q9H239 520 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 EQTNQ9NQ60 294 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 PIH1D3Q9NQM4 214 aaKnown RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 MBNL1Q9NR56 388 aaKnown RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 ZFP57Q9NU63 452 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 STK26Q9P289 416 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 RHCGQ9UBD6 479 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 SPIN1Q9Y657 262 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 A0A1B0GVY2 172 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 ANKUB1A6NFN9 424 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 P2RY10O00398 339 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 XRCC3O43542 346 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 XPNPEP2O43895 674 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 DNTTP04053 509 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 LINGO3P0C6S8 592 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 FGF5P12034 268 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 CKMT2P17540 419 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 ANOS1P23352 680 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 PSMC4P43686 418 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 SLC9A3P48764 834 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 VEGFCP49767 419 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 MBTD1Q05BQ5 628 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 DMP1Q13316 513 aaPredicted RBP4□□□□□ -1.77
LRCH3-211ENST00000466054 IL11RAQ14626 422 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 C19orf48Q6RUI8 117 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 DENND5BQ6ZUT9 1274 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 CPSF7Q8N684 471 aaKnown RBP4□□□□□ -1.77
LRCH3-211ENST00000466054 TC2NQ8N9U0 490 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 KCTD6Q8NC69 237 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 OR2AJ1Q8NGZ0 328 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 CFAP61Q8NHU2 1237 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 CTCFLQ8NI51 663 aaPredicted RBP4□□□□□ -1.77
LRCH3-211ENST00000466054 ATL1Q8WXF7 558 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 TAF15Q92804 592 aaKnown RBP eCLIP4□□□□□ -1.77
LRCH3-211ENST00000466054 SLAMF9Q96A28 289 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 SGK494Q96LW2 274 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 UHRF2Q96PU4 802 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 BTBD10Q9BSF8 475 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 CENPOQ9BU64 300 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 DPAGT1Q9H3H5 408 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 ANKZF1Q9H8Y5 726 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 UPF2Q9HAU5 1272 aaKnown RBP4□□□□□ -1.77
LRCH3-211ENST00000466054 OLFML3Q9NRN5 406 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 OLAHQ9NV23 265 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 SLC38A7Q9NVC3 462 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 TAAR2Q9P1P5 351 aa4□□□□□ -1.77
LRCH3-211ENST00000466054 FAF1Q9UNN5 650 aaPredicted RBP4□□□□□ -1.77
LRCH3-211ENST00000466054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4□□□□□ -1.77
LRCH3-211ENST00000466054 TRBC2A0A5B9 178 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 UBE2CO00762 179 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 OR2T7P0C7T2 308 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 DANCRP0C864 163 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 PFKFB1P16118 471 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 CBLP22681 906 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 SLC6A6P31641 620 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 GABRA5P31644 462 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 ZNF75DP51815 510 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 CDH13P55290 713 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 RPS18P62269 152 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 HSPB3Q12988 150 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 RASA2Q15283 850 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 RBBP5Q15291 538 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 KYNUQ16719 465 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 TCP11X2Q5H9J9 407 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 MDH1BQ5I0G3 518 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 RNASEH2BQ5TBB1 312 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 KRT80Q6KB66 452 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 RPUSD3Q6P087 351 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 CAMKMTQ7Z624 323 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 ZNF473Q8WTR7 871 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 PGAP3Q96FM1 320 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 ZNF830Q96NB3 372 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 FNDC11Q9BVV2 318 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 WNT5BQ9H1J7 359 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 RABEP2Q9H5N1 569 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 TFB2MQ9H5Q4 396 aaKnown RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 ZNF334Q9HCZ1 680 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 DPP3Q9NY33 737 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 HAO2Q9NYQ3 351 aa3.99□□□□□ -1.77
LRCH3-211ENST00000466054 GREB1LQ9C091 1923 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-211ENST00000466054 OR10H2O60403 315 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms