RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ABRQ12979 859 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 PRKG2Q13237 762 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 FRG1Q14331 258 aaKnown RBP12.07□□□□□ -0.48
CHPF2-202ENST00000465601 PLCL1Q15111 1095 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 TMED2Q15363 201 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 DNTTIP2Q5QJE6 756 aaKnown RBP12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SNAP47Q5SQN1 464 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 PHF19Q5T6S3 580 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 TMEM71Q6P5X7 295 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SPNS2Q8IVW8 549 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SLITRK4Q8IW52 837 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 CNTN4Q8IWV2 1026 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SLC22A15Q8IZD6 547 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 LRRN4CLQ8ND94 238 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 CFAP61Q8NHU2 1237 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 GABPB2Q8TAK5 448 aaPredicted RBP12.07□□□□□ -0.48
CHPF2-202ENST00000465601 GSDMBQ8TAX9 411 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 ZFPM2Q8WW38 1151 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 RSC1A1Q92681 617 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 GATA6Q92908 595 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 C9orf72Q96LT7 481 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 TMEM74Q96NL1 305 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 CCDC68Q9H2F9 335 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 KIR3DX1Q9H7L2 352 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 ZDHHC18Q9NUE0 388 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SLC24A2Q9UI40 661 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 DMXL2Q8TDJ6 3036 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 EPG5Q9HCE0 2579 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 ASPMQ8IZT6 3477 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 FREM2Q5SZK8 3169 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 IGHV5-10-1A0A0J9YXX1 117 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 A0A1W2PNU3 283 aaPredicted RBP12.06□□□□□ -0.48
CHPF2-202ENST00000465601 A8MU76 341 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 C1QTNF9BB2RNN3 333 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 E5RI56 91 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 KPNA5O15131 536 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
CHPF2-202ENST00000465601 SLCO2B1O94956 709 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 C1QTNF9P0C862 333 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 NDUFS1P28331 727 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 CCKBRP32239 447 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 LIMK2P53671 638 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 MGAT5Q09328 741 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 CLPPQ16740 277 aaPredicted RBP12.06□□□□□ -0.48
CHPF2-202ENST00000465601 PLEKHS1Q5SXH7 462 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 FOXR1Q6PIV2 292 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
CHPF2-202ENST00000465601 RCBTB1Q8NDN9 531 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 OR4E2Q8NGC2 313 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 OR4D9Q8NGE8 314 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 OR5AR1Q8NGP9 310 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 GRAMD1AQ96CP6 724 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 CCDC74BQ96LY2 380 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 NDNQ99608 321 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 SLC30A3Q99726 388 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 NRTNQ99748 197 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 DPYSL5Q9BPU6 564 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 HGH1Q9BTY7 390 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
CHPF2-202ENST00000465601 STRADBQ9C0K7 418 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 EPB41L1Q9H4G0 881 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 MVB12BQ9H7P6 319 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 LATS2Q9NRM7 1088 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 KLHL3Q9UH77 587 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 TSR3Q9UJK0 312 aaKnown RBP12.06□□□□□ -0.48
CHPF2-202ENST00000465601 ASF1AQ9Y294 204 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 AK5Q9Y6K8 562 aa12.06□□□□□ -0.48
CHPF2-202ENST00000465601 CCDC187A0A096LP49 1063 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 PMS2P1A4D2B8 440 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 ESPNB1AK53 854 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 CAPN5O15484 640 aaPredicted RBP12.05□□□□□ -0.48
CHPF2-202ENST00000465601 PIAS1O75925 651 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 MPOP05164 745 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 RHOXF2BP0C7M4 288 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 THRAP10827 490 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 CLCN7P51798 805 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 GFERP55789 205 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 GPX6P59796 221 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 CYP4F3Q08477 520 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 C16orf72Q14CZ0 275 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 ACSBG2Q5FVE4 666 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 C3orf38Q5JPI3 329 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 RBM20Q5T481 1227 aaKnown RBP12.05□□□□□ -0.48
CHPF2-202ENST00000465601 UNQ6494/PRO21346Q6UXR6 183 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 KIAA0408Q6ZU52 694 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 C3orf62Q6ZUJ4 267 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 PLXDC1Q8IUK5 500 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 ZBTB2Q8N680 514 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 SIDT2Q8NBJ9 832 aaKnown RBP12.05□□□□□ -0.48
CHPF2-202ENST00000465601 ACVR1CQ8NER5 493 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 OR52E1Q8NGJ3 308 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 WDR36Q8NI36 951 aaKnown RBP12.05□□□□□ -0.48
CHPF2-202ENST00000465601 SKA2Q8WVK7 121 aaPredicted RBP12.05□□□□□ -0.48
CHPF2-202ENST00000465601 LCN9Q8WX39 176 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
CHPF2-202ENST00000465601 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 GPR21Q99679 349 aa12.05□□□□□ -0.48
CHPF2-202ENST00000465601 RHOXF2Q9BQY4 288 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms