RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 TSNAXIP1Q2TAA8 658 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 NAPRTQ6XQN6 538 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 ASRGL1Q7L266 308 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CHST15Q7LFX5 561 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CLNKQ7Z7G1 428 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 AMZ2Q86W34 360 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SIDT2Q8NBJ9 832 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SUMF1Q8NBK3 374 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 GIMAP7Q8NHV1 300 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 OR2M4Q96R27 311 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 TMEM168Q9H0V1 697 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 ARRDC1-AS1Q9H2J1 176 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 CAPN10Q9HC96 672 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SLC40A1Q9NP59 571 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 DNAJC28Q9NX36 388 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 ZFP69BQ9UJL9 534 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 ACOT9Q9Y305 439 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 DHRS7Q9Y394 339 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 PCDHGA5Q9Y5G8 931 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 SNX11Q9Y5W9 270 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 ST14Q9Y5Y6 855 aa16.59■□□□□ 0.25
EXOSC3-203ENST00000465229 C17orf113A0A1B0GUU1 675 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 MGAT4DA6NG13 374 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 PATE3B3GLJ2 98 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 TMEM114B3SHH9 223 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 G3V2L1 256 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 CSF2P04141 144 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 MYL2P10916 166 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ACP5P13686 325 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 NME1P15531 152 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 KCNA4P22459 653 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 AOAHP28039 575 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 PBLDP30039 288 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC1A6P48664 564 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 KPNA2P52292 529 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ARHGAP8P85298 464 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ZNF460Q14592 562 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 XKR5Q6UX68 686 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 MTDHQ86UE4 582 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 PHACTR4Q8IZ21 702 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 OXR1Q8N573 874 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 OR2L2Q8NH16 312 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 CD200R1Q8TD46 325 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ELMO1Q92556 727 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 TSPAN17Q96FV3 270 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 WWP1Q9H0M0 922 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ERVMER34-1Q9H9K5 563 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 ZNF358Q9NW07 568 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 TRNAU1APQ9NX07 287 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 HEY2Q9UBP5 337 aa16.58■□□□□ 0.24
EXOSC3-203ENST00000465229 PHGDHO43175 533 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 CFIP05156 583 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 GSTM1P09488 218 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 JUNDP17535 347 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 MPLP40238 635 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 RASSF2P50749 326 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 BLKP51451 505 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC12A2P55011 1212 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 IRF9Q00978 393 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 GSTM4Q03013 218 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 LAIR1Q6GTX8 287 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC23A3Q6PIS1 610 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 PAQR3Q6TCH7 311 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 TMEM207Q6UWW9 146 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 ZYG11AQ6WRX3 759 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 WDR75Q8IWA0 830 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 CFAP206Q8IYR0 622 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 LILRA3Q8N6C8 439 aaPredicted RBP16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 PIWIL2Q8TC59 973 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 PPP4R1Q8TF05 950 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 INPP5DQ92835 1189 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 KLHL29Q96CT2 875 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 TIMM29Q9BSF4 260 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 C20orf27Q9GZN8 174 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 IRF2BPLQ9H1B7 796 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 KCNH6Q9H252 994 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 FSCN3Q9NQT6 498 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 KLC4Q9NSK0 619 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 KLHL42Q9P2K6 505 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 FAM8A1Q9UBU6 413 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 TRMT6Q9UJA5 497 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 DNAJC16Q9Y2G8 782 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 OTOGLQ3ZCN5 2332 aa16.57■□□□□ 0.24
EXOSC3-203ENST00000465229 PRR19A6NJB7 356 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 TRIM13O60858 407 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 GPC4O75487 556 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 KLHL2O95198 593 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 WISP3O95389 354 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC26A3P40879 764 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 CTBSQ01459 385 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 PDAP1Q13442 181 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 BOP1Q14137 746 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 NFE2L1Q14494 772 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 KRT72Q14CN4 511 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 CCDC6Q16204 474 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms