RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 DUXAA6NLW8 204 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 AHCYL1O43865 530 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 ZWINTO95229 277 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 PLA2G4BP0C869 781 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 NR2F1P10589 423 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 ITGA3P26006 1051 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 PSMC6P62333 389 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 PPIGQ13427 754 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTCD3-205ENST00000464541 TMEM30BQ3MIR4 351 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 MDH1BQ5I0G3 518 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 ARHGAP17Q68EM7 881 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 FIGLAQ6QHK4 219 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 ZNF554Q86TJ5 538 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 FOXP4Q8IVH2 680 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-205ENST00000464541 APLFQ8IW19 511 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-205ENST00000464541 SCML4Q8N228 414 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 OR10S1Q8NGN2 331 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 TMCO6Q96DC7 493 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 MS4A10Q96PG2 267 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 MYADMQ96S97 322 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 PSD2Q9BQI7 771 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 RHNO1Q9BSD3 238 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 MXD3Q9BW11 206 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 ZNF696Q9H7X3 374 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 PTTG2Q9NZH5 202 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 PPIEQ9UNP9 301 aaKnown RBP5.44□□□□□ -1.54
PTCD3-205ENST00000464541 FLT1P17948 1338 aa5.44□□□□□ -1.54
PTCD3-205ENST00000464541 A0A1W2PN81 502 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 OR6C76A6NM76 312 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 RNASEH1O60930 286 aaKnown RBP5.43□□□□□ -1.54
PTCD3-205ENST00000464541 PRSS56P0CW18 603 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 CHRNA7P36544 502 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 MATR3P43243 847 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTCD3-205ENST00000464541 KIAA1644Q3SXP7 199 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 ISCA2Q86U28 154 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 FBXO39Q8N4B4 442 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 WDSUB1Q8N9V3 476 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 OR2AJ1Q8NGZ0 328 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 RNF128Q8TEB7 428 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 TMEM190Q8WZ59 177 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 VN1R1Q9GZP7 353 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 DPAGT1Q9H3H5 408 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 GDE1Q9NZC3 331 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 BCCIPQ9P287 314 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTCD3-205ENST00000464541 CPSF2Q9P2I0 782 aaKnown RBP5.43□□□□□ -1.54
PTCD3-205ENST00000464541 ERRFI1Q9UJM3 462 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-205ENST00000464541 OSGIN1Q9UJX0 560 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 RPS6KA6Q9UK32 745 aa5.43□□□□□ -1.54
PTCD3-205ENST00000464541 SOS1Q07889 1333 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-205ENST00000464541 A8MV72 311 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-205ENST00000464541 SLC22A2O15244 555 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 IPO8O15397 1037 aaKnown RBP5.42□□□□□ -1.54
PTCD3-205ENST00000464541 XRCC3O43542 346 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 STARD3NLO95772 234 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 PAK4O96013 591 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-205ENST00000464541 PATE4P0C8F1 98 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 ACP2P11117 423 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 SLC9A3P48764 834 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 NR0B1P51843 470 aaKnown RBP5.42□□□□□ -1.54
PTCD3-205ENST00000464541 MRGPRG-AS1Q2M3A8 158 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 GARNL3Q5VVW2 1013 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 MFSD6Q6ZSS7 791 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 TMEM173Q86WV6 379 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-205ENST00000464541 TICAM2Q86XR7 235 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 TSPAN14Q8NG11 270 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 HSD17B8Q92506 261 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 RTP3Q9BQQ7 232 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 FNDC11Q9BVV2 318 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 BARHL1Q9BZE3 327 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 SLC52A3Q9NQ40 469 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 FLRT3Q9NZU0 649 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 STK26Q9P289 416 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 IL17BQ9UHF5 180 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
PTCD3-205ENST00000464541 ANKUB1A6NFN9 424 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 E9PI62 339 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 OR10H2O60403 315 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 OR2T7P0C7T2 308 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 RNF224P0DH78 156 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 CHRNB4P30926 498 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 LIG4P49917 911 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 CX3CL1P78423 397 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 LGALS3BPQ08380 585 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 CBWD6Q4V339 395 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 CBWD3Q5JTY5 395 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 TEX38Q6PEX7 206 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 PRPF39Q86UA1 669 aaKnown RBP5.41□□□□□ -1.54
PTCD3-205ENST00000464541 OR1J1Q8NGS3 322 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 SPACA9Q96E40 222 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-205ENST00000464541 SENP5Q96HI0 755 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-205ENST00000464541 WNT5BQ9H1J7 359 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 ARRDC1-AS1Q9H2J1 176 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 PELI2Q9HAT8 420 aa5.41□□□□□ -1.54
PTCD3-205ENST00000464541 CRNNQ9UBG3 495 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-205ENST00000464541 PRKRAO75569 313 aaKnown RBP5.4□□□□□ -1.54
PTCD3-205ENST00000464541 PIGNO95427 931 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 BCL10O95999 233 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 CLPTM1O96005 669 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 GABRA5P31644 462 aa5.4□□□□□ -1.54
PTCD3-205ENST00000464541 UBXN2AP68543 259 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms