RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TPBGLP0DKB5 382 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 FOLR1P15328 257 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 ZNF28P17035 718 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 NELFEP18615 380 aaKnown RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 POLR2CP19387 275 aaPredicted RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 FNTAP49354 379 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 GSTM4Q03013 218 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 PAPD7Q5XG87 772 aaKnown RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 KLHL35Q6PF15 583 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 CREG2Q8IUH2 290 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 KRT222Q8N1A0 295 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 NAT8LQ8N9F0 302 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 OR52E1Q8NGJ3 308 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 OR5AR1Q8NGP9 310 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 ELMO2Q96JJ3 720 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 SERPINB12Q96P63 405 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 HGH1Q9BTY7 390 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 XKR8Q9H6D3 395 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 ANAPC5Q9UJX4 755 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 PCDHB11Q9Y5F2 797 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 HEBP2Q9Y5Z4 205 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 QSOX1O00391 747 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 BTN3A3O00478 584 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 TCP1P17987 556 aaKnown RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 NDUFS1P28331 727 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 TTPAP49638 278 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 KPNA2P52292 529 aaKnown RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 DNTTIP2Q5QJE6 756 aaKnown RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 KIAA1614Q5VZ46 1190 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 CEACAM20Q6UY09 585 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 OOSP2Q86WS3 158 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 LCN9Q8WX39 176 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 SLC41A2Q96JW4 573 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 TEFMQ96QE5 360 aaKnown RBP12.61□□□□□ -0.39
XRN1-203ENST00000463916 TTC1Q99614 292 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 ATRXP46100 2492 aa12.61□□□□□ -0.39
XRN1-203ENST00000463916 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 STK17BO94768 372 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 F7P08709 466 aaPredicted RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 MAGEA3P43357 314 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 SARNPP82979 210 aaKnown RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 HSPA14Q0VDF9 509 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 MANEAQ5SRI9 462 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 CASC4Q6P4E1 433 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 MCUQ8NE86 351 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 SRMSQ9H3Y6 488 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 TFB2MQ9H5Q4 396 aaKnown RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 MVB12BQ9H7P6 319 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 TLCD2A6NGC4 264 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 SDR42E2A6NKP2 422 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 BTN3A1O00481 513 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 RAD1O60671 282 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 GPC4O75487 556 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 TIAF1O95411 115 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 EBLN1P0CF75 366 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 MLNP12872 115 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 PTGIRP43119 386 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 AARS2Q5JTZ9 985 aaKnown RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 RNASEH2BQ5TBB1 312 aaKnown RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 ZNF449Q6P9G9 518 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 ADGRF3Q8IZF5 1079 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 UNC5BQ8IZJ1 945 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 CACNA2D3Q8IZS8 1091 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 GRK7Q8WTQ7 553 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 UBXN4Q92575 508 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 CARD6Q9BX69 1037 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 ICKQ9UPZ9 632 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 ASF1AQ9Y294 204 aa12.6□□□□□ -0.39
XRN1-203ENST00000463916 TMEM184BQ9Y519 407 aaPredicted RBP12.6□□□□□ -0.39
XRN1-203ENST00000463916 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
XRN1-203ENST00000463916 LIFP15018 202 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 IVDP26440 423 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 AOAHP28039 575 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 PPARGP37231 505 aaPredicted RBP12.59□□□□□ -0.39
XRN1-203ENST00000463916 CYP4F2P78329 520 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 PPP1R7Q15435 360 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 ANKRD20A4Q4UJ75 823 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 SYTL3Q4VX76 610 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 ZNF789Q5FWF6 425 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 CTSL3PQ5NE16 218 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
XRN1-203ENST00000463916 CENPUQ71F23 418 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 TMEM135Q86UB9 458 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 AMIGO1Q86WK6 493 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 SPNS2Q8IVW8 549 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 SLC22A15Q8IZD6 547 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 IL22RA1Q8N6P7 574 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 SIGLEC10Q96LC7 697 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 CD180Q99467 661 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 XAB2Q9HCS7 855 aaKnown RBP12.59□□□□□ -0.39
XRN1-203ENST00000463916 PCYOX1Q9UHG3 505 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 POMT2Q9UKY4 750 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
XRN1-203ENST00000463916 SAR1BQ9Y6B6 198 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms