RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 JRKO75564 520 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 OR2B3O76000 313 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 COX6B1P14854 86 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 CAPN3P20807 821 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 SPAM1P38567 509 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 LMAN1P49257 510 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 MYL5Q02045 173 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 AP1B1Q10567 949 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 ZBTB17Q13105 803 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 ZNF630Q2M218 657 aaPredicted RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 VWA2Q5GFL6 755 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 GPRC6AQ5T6X5 926 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 PRAMEF13Q5VWM6 474 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 FAM180AQ6UWF9 173 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 CDHR3Q6ZTQ4 885 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 APTXQ7Z2E3 356 aaKnown RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 CFAP206Q8IYR0 622 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 PQLC3Q8N755 202 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 BTBD6Q96KE9 485 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 LMF1Q96S06 567 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 CHRNA10Q9GZZ6 450 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 EPS8L2Q9H6S3 715 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 OLAHQ9NV23 265 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 HACD3Q9P035 362 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 IL17CQ9P0M4 197 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
PCCB-203ENST00000462542 ANKRD12Q6UB98 2062 aa11.28□□□□□ -0.6
PCCB-203ENST00000462542 MYO7BQ6PIF6 2116 aa11.27□□□□□ -0.6
PCCB-203ENST00000462542 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 GLYATL1P3A0A0U1RQE8 302 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 C2orf74A8MZ97 194 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 EPOP01588 193 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 MMP11P24347 488 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 HTR1EP28566 365 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 PBLDP30039 288 aaPredicted RBP11.27□□□□□ -0.61
PCCB-203ENST00000462542 AKT1P31749 480 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.61
PCCB-203ENST00000462542 PDK1Q15118 436 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 NKAIN1Q4KMZ8 207 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 DUS1LQ6P1R4 473 aaKnown RBP11.27□□□□□ -0.61
PCCB-203ENST00000462542 FAM151BQ6UXP7 276 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 SPNS3Q6ZMD2 512 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 BNC2Q6ZN30 1099 aaPredicted RBP11.27□□□□□ -0.61
PCCB-203ENST00000462542 HOOK3Q86VS8 718 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
PCCB-203ENST00000462542 ZNF398Q8TD17 642 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 ITLN2Q8WWU7 325 aaPredicted RBP11.27□□□□□ -0.61
PCCB-203ENST00000462542 FERD3LQ96RJ6 166 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 GLOD4Q9HC38 313 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 TXLNGQ9NUQ3 528 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 SMOXQ9NWM0 555 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 PKP3Q9Y446 797 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 CSAG2Q9Y5P2 127 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 SVILO95425 2214 aa11.27□□□□□ -0.61
PCCB-203ENST00000462542 CNTRLQ7Z7A1 2325 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 C17orf113A0A1B0GUU1 675 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 LOC285095A0A1B0GVY8 99 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 H3BMH7 237 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 BTN3A3O00478 584 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 BTN3A1O00481 513 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 PMPCBO75439 489 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 MT-CYBP00156 380 aaPredicted RBP11.26□□□□□ -0.61
PCCB-203ENST00000462542 CYP1A2P05177 515 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 POLBP06746 335 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 UMODP07911 640 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 PIM1P11309 404 aaPredicted RBP11.26□□□□□ -0.61
PCCB-203ENST00000462542 SSTR2P30874 369 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 CD151P48509 253 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.26□□□□□ -0.61
PCCB-203ENST00000462542 BCL7AQ4VC05 210 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 TEX44Q53QW1 395 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 C1orf189Q5VU69 101 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 TLDC1Q6P9B6 456 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 XKRXQ6PP77 449 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 SARM1Q6SZW1 724 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 RPTNQ6XPR3 784 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 MRGPRGQ86SM5 289 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 AMIGO1Q86WK6 493 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 NXPE1Q8N323 547 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 SPATA22Q8NHS9 363 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 DENND1AQ8TEH3 1009 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 CPLX3Q8WVH0 158 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 CNDP1Q96KN2 507 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 RMDN2Q96LZ7 410 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 RNF157Q96PX1 679 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 LHPPQ9H008 270 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 SPRTNQ9H040 489 aaPredicted RBP11.26□□□□□ -0.61
PCCB-203ENST00000462542 THAP2Q9H0W7 228 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 MVB12BQ9H7P6 319 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 FAM153AQ9UHL3 310 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 CDYLQ9Y232 598 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 HEY1Q9Y5J3 304 aa11.26□□□□□ -0.61
PCCB-203ENST00000462542 BZW2Q9Y6E2 419 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms