RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 USP18Q9UMW8 372 aa9.07□□□□□ -0.96
LINC01140-201ENST00000461990 MRPL11Q9Y3B7 192 aaKnown RBP9.07□□□□□ -0.96
LINC01140-201ENST00000461990 NT5C1B-RDH14C9J2C7 533 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ERVK-10P10266 1014 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 PTPN5P54829 565 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ZNF91Q05481 1191 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 TBCEQ15813 527 aaPredicted RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ZNF79Q15937 498 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 BAK1Q16611 211 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 QRICH1Q2TAL8 776 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 FAM98BQ52LJ0 330 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 NOL9Q5SY16 702 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 LAIR1Q6GTX8 287 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 KDELC1Q6UW63 502 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 STRA8Q7Z7C7 330 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 TTLL6Q8N841 843 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 JOSD2Q8TAC2 188 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ST8SIA2Q92186 375 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 C19orf60Q96EN9 201 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SLC47A1Q96FL8 570 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SEPHS2Q99611 448 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 HPF1Q9NWY4 346 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 MUTYHQ9UIF7 546 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 TMEFF2Q9UIK5 374 aaPredicted RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 U3KQV3 271 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 A0A1W2PQ09 198 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 EFCAB10A6NFE3 127 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SPATA31C2B4DYI2 1134 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CA12O43570 354 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SSX5O60225 188 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 IFNA7P01567 189 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 LCKP06239 509 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CD72P21854 359 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SNAP25P60880 206 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 YBX1P67809 324 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CSNK2BP67870 215 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 RAPSNQ13702 412 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 PCBP1Q15365 356 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 DUSP6Q16828 381 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 MICAQ29983 383 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 MPP7Q5T2T1 576 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SUSD4Q5VX71 490 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CYHR1Q6ZMK1 362 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 FAM183BPQ6ZVS7 135 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 RRM2BQ7LG56 351 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GHDCQ8N2G8 530 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CLRN3Q8NCR9 226 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ZFPM2Q8WW38 1151 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CPB2Q96IY4 423 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GPR22Q99680 433 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 MRPL57Q9BQC6 102 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 TBCDQ9BTW9 1192 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 APOBEC3GQ9HC16 384 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 EML4Q9HC35 981 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 TBX20Q9UMR3 447 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GINS2Q9Y248 185 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 KLK4Q9Y5K2 254 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 KCNMB2Q9Y691 235 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 APOL1O14791 398 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CFBP00751 764 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 MT-ND1P03886 318 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ALDOCP09972 364 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 NCK1P16333 377 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ITGB6P18564 788 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 RRAS2P62070 204 aaPredicted RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CAMK1Q14012 370 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 CAPRIN1Q14444 709 aaKnown RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GBX1Q14549 363 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 QPRTQ15274 297 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GPR158Q5T848 1215 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GPD1LQ8N335 351 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 FSTL5Q8N475 847 aaPredicted RBP9.06□□□□□ -0.96
LINC01140-201ENST00000461990 UBASH3BQ8TF42 649 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 GPR78Q96P69 363 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 NPAS1Q99742 590 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 REG4Q9BYZ8 158 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 ACSS2Q9NR19 701 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 FBXO10Q9UK96 956 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 PCOLCE2Q9UKZ9 415 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 RNF215Q9Y6U7 377 aa9.06□□□□□ -0.96
LINC01140-201ENST00000461990 A0A0A6YYJ9 748 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 KRBOX1C9JBD0 128 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 NR5A2O00482 541 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 VPS26AO75436 327 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 ERN1O75460 977 aaKnown RBP9.05□□□□□ -0.96
LINC01140-201ENST00000461990 NPPAP01160 153 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 CDK1P06493 297 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 MGAT1P26572 445 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 KIR2DL3P43628 341 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 CDH6P55285 790 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 IL5RAQ01344 420 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 ORC1Q13415 861 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 GRM7Q14831 915 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 TATDN3Q17R31 274 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 TDRD10Q5VZ19 366 aaKnown RBP9.05□□□□□ -0.96
LINC01140-201ENST00000461990 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
LINC01140-201ENST00000461990 C19orf48Q6RUI8 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms