RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MARS2Q96GW9 593 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ZFYVE19Q96K21 471 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 GDAP1L1Q96MZ0 367 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC68Q9H2F9 335 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM83DQ9H4H8 585 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ZBTB26Q9HCK0 441 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CSNK1G1Q9HCP0 422 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SAYSD1Q9NPB0 183 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ASAH2Q9NR71 780 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 VPS45Q9NRW7 570 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SEPT11Q9NVA2 429 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SYBUQ9NX95 663 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ZDHHC7Q9NXF8 308 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 NDUFA13Q9P0J0 144 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PTGFRNQ9P2B2 879 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SHOC2Q9UQ13 582 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CDYLQ9Y232 598 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 MTO1Q9Y2Z2 717 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SPEGQ15772 3267 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SYNJ2BP-COX16A0A087WUM0 186 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF840PA6NDX5 716 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 HMX3A6NHT5 357 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 TTC34A8MYJ7 566 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 DNPH1O43598 174 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PIAS2O75928 621 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 MTA2O94776 668 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 FYNP06241 537 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 POLBP06746 335 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 LINGO3P0C6S8 592 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ATXN1LP0C7T5 689 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 LAMP2P13473 410 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 HOXB8P17481 243 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 FCARP24071 287 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 YWHAQP27348 245 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 HOXC13P31276 330 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 STAT1P42224 750 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 MTHFRP42898 656 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 NUMBP49757 651 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ATXN1P54253 815 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 BCAT1P54687 386 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 RNASE9P60153 205 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 YWHAEP62258 255 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 CCZ1BP86790 482 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 CCZ1P86791 482 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PDE1BQ01064 536 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 BST2Q10589 180 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PDCLQ13371 301 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 KCNAB1Q14722 419 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 MTF1Q14872 753 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 VEPH1Q14D04 833 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 BEAN1Q3B7T3 259 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 CACHD1Q5VU97 1274 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 DAB2IPQ5VWQ8 1189 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SYPL2Q5VXT5 272 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ARMC3Q5W041 872 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 TRNP1Q6NT89 227 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 NEPROQ6NW34 567 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 VSTM1Q6UX27 236 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM183BPQ6ZVS7 135 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ENOSF1Q7L5Y1 443 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 NLRP9Q7RTR0 991 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 NANOGNBQ7Z5D8 188 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ADGRG3Q86Y34 549 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ARID3BQ8IVW6 561 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 NUP93Q8N1F7 819 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 RNF10Q8N5U6 811 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 EMC1Q8N766 993 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ARL10Q8N8L6 244 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PSD4Q8NDX1 1056 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 CMASQ8NFW8 434 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SPATA18Q8TC71 538 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 C2orf15Q8WU43 125 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 DYDC1Q8WWB3 177 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SPATA17Q96L03 361 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 COQ10AQ96MF6 247 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 AGPAT1Q99943 283 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 C11orf70Q9BRQ4 267 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SYT11Q9BT88 431 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PHF7Q9BWX1 381 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 YIPF3Q9GZM5 350 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 LINC00597Q9H2U6 94 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 VCXQ9H320 206 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PABPC3Q9H361 631 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 HAUS4Q9H6D7 363 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 PARVBQ9HBI1 364 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 LRRC4Q9HBW1 653 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC40A1Q9NP59 571 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 AKIP1Q9NQ31 210 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 UBAP1Q9NZ09 502 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 IL37Q9NZH6 218 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 TRPM5Q9NZQ8 1165 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 COX16Q9P0S2 106 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 STK39Q9UEW8 545 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 MUTYHQ9UIF7 546 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 TTC7AQ9ULT0 858 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms