RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 SMARCAL1Q9NZC9 954 aa11.48□□□□□ -0.57
SOX2-OT-201ENST00000460739 RIMKLBQ9ULI2 386 aa11.48□□□□□ -0.57
SOX2-OT-201ENST00000460739 GUCA1BQ9UMX6 200 aa11.48□□□□□ -0.57
SOX2-OT-201ENST00000460739 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 CCDC162PA2VCL2 907 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 OR51F1A6NGY5 319 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 QSOX1O00391 747 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 LIN7AO14910 233 aaPredicted RBP11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 CREG1O75629 220 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 WISP1O95388 367 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 GAS8O95995 478 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 NTRK1P04629 796 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 FURINP09958 794 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 MSL3P1P0C860 447 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 FOXN2P32314 431 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 PREPP48147 710 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 GSDMDP57764 484 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 SEMA5AQ13591 1074 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 LAMB3Q13751 1172 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 ERV3-1Q14264 604 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 GPR19Q15760 415 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 CCDC38Q502W7 563 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 FBXO38Q6PIJ6 1188 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 PHC3Q8NDX5 983 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 OR52E1Q8NGJ3 308 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 OR13J1Q8NGT2 312 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 CT55Q8WUE5 264 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 TFGQ92734 400 aaPredicted RBP11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 PPM1MQ96MI6 270 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 RANBP9Q96S59 729 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 PITPNM3Q9BZ71 974 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 KCND1Q9NSA2 647 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 KCNMB2Q9Y691 235 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 SPTA1P02549 2419 aa11.47□□□□□ -0.57
SOX2-OT-201ENST00000460739 CCDC78A2IDD5 438 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 GSAPA4D1B5 854 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 SLC9B1P1A6NJY1 282 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 PYCARD-AS1I3L0S3 204 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 BTN3A3O00478 584 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 BTN3A1O00481 513 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 ARHGAP6O43182 974 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 CPNE3O75131 537 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 KATNA1O75449 491 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 SCRG1O75711 98 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 IFNB1P01574 187 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 FTH1P02794 183 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 CDH3P22223 829 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 ADRA1DP25100 572 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 PRDX3P30048 256 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 GRIA1P42261 906 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 CSRP3P50461 194 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 ACVR1Q04771 509 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 LYPLAL1Q5VWZ2 237 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 FAM199XQ6PEV8 388 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 PPP1R21Q6ZMI0 780 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 ZNF517Q6ZMY9 492 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 AMIGO1Q86WK6 493 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 TMEM126BQ8IUX1 230 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 C9orf43Q8TAL5 461 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 PEX13Q92968 403 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 ABHD17AQ96GS6 310 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 TLR10Q9BXR5 811 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 GPR87Q9BY21 358 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 ACTL8Q9H568 366 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 CLMPQ9H6B4 373 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 AKIRIN1Q9H9L7 192 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 SYTL2Q9HCH5 934 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 CASS4Q9NQ75 786 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 RAB6BQ9NRW1 208 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 SOHLH2Q9NX45 425 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 POLHQ9Y253 713 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 PRSS21Q9Y6M0 314 aa11.46□□□□□ -0.57
SOX2-OT-201ENST00000460739 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 SLC5A10A0PJK1 596 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 PIPSLA2A3N6 862 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 C2orf74A8MZ97 194 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 E7EVH7 732 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 OR56A5P0C7T3 313 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 ETS1P14921 441 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 ST6GAL1P15907 406 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 ACADLP28330 430 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 LMAN1P49257 510 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 PLOD1Q02809 727 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 KCNC4Q03721 635 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 PRKG2Q13237 762 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 SNX1Q13596 522 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 SIX1Q15475 284 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 CCNG2Q16589 344 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 AFTPHQ6ULP2 937 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 ZNF662Q6ZS27 426 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 NLRP9Q7RTR0 991 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 PRUNE1Q86TP1 453 aa11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 PTRH1Q86Y79 214 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-201ENST00000460739 ADGRF3Q8IZF5 1079 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms