RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 OR2T11Q8NH01 316 aa15.24■□□□□ 0.03
SSR4-206ENST00000460616 CCDC115Q96NT0 180 aa15.24■□□□□ 0.03
SSR4-206ENST00000460616 AGAP4Q96P64 663 aa15.24■□□□□ 0.03
SSR4-206ENST00000460616 SIK2Q9H0K1 926 aa15.24■□□□□ 0.03
SSR4-206ENST00000460616 AP5M1Q9H0R1 490 aa15.24■□□□□ 0.03
SSR4-206ENST00000460616 MN1Q10571 1320 aaPredicted RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 CLDN24A6NM45 220 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 RGS10O43665 173 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 ADAMTS4O75173 837 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 UROSP10746 265 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 ALOX12P18054 663 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 ARSDP51689 593 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 PRMT2P55345 433 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 PWP1Q13610 501 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 SIM2Q14190 667 aaPredicted RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 GALNT5Q7Z7M9 940 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 OSTM1Q86WC4 334 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 SNX18Q96RF0 628 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 MFSD1Q9H3U5 465 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 TFB2MQ9H5Q4 396 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 ZBTB20Q9HC78 741 aaPredicted RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 DDX28Q9NUL7 540 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 NUDT5Q9UKK9 219 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 CARD8Q9Y2G2 431 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 PDZK1P1A8MUH7 402 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 H3BRB1 525 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 KMOO15229 486 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 MITFO75030 526 aaPredicted RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 KRT6CP48668 564 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 ZNF45Q02386 682 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 MVKQ03426 396 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 ZNF549Q6P9A3 640 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 EFL1Q7Z2Z2 1120 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 SYVN1Q86TM6 617 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 CLIP3Q96DZ5 547 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 THUMPD3Q9BV44 507 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 NUSAP1Q9BXS6 441 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 SLC39A8Q9C0K1 460 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 TMEM45AQ9NWC5 275 aa15.23■□□□□ 0.03
SSR4-206ENST00000460616 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
SSR4-206ENST00000460616 METTL15A6NJ78 407 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 ARNTLO00327 626 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 HAT1O14929 419 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 PAPSS2O95340 614 aaPredicted RBP15.22■□□□□ 0.03
SSR4-206ENST00000460616 ITGAMP11215 1152 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
SSR4-206ENST00000460616 DGKQP52824 942 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 CXCR4P61073 352 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 TIAL1Q01085 375 aaKnown RBP eCLIP15.22■□□□□ 0.03
SSR4-206ENST00000460616 CHRNEQ04844 493 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 TPRG1LQ5T0D9 272 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 SPATC1Q76KD6 591 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 HIPK1Q86Z02 1210 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 PARP16Q8N5Y8 322 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 LINC01465Q8N7H1 131 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 CELF2-AS1Q8N7Q2 184 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 OR8J3Q8NGG0 315 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 OR6F1Q8NGZ6 308 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 OR10A6Q8NH74 314 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 STAG3L4Q8TBR4 150 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 NUDT8Q8WV74 236 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 FAM162AQ96A26 154 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 RHBDF1Q96CC6 855 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 ZNF560Q96MR9 790 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 RHNO1Q9BSD3 238 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 ARNT2Q9HBZ2 717 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 CCDC177Q9NQR7 707 aaPredicted RBP15.22■□□□□ 0.03
SSR4-206ENST00000460616 RNF112Q9ULX5 631 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 SCN10AQ9Y5Y9 1956 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 ALX3O95076 343 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 PGLSO95336 258 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 CD4P01730 458 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 APOA1P02647 267 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 TGFBR2P37173 567 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 TAF6P49848 677 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 MRPS15P82914 257 aaKnown RBP15.22■□□□□ 0.03
SSR4-206ENST00000460616 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 GNASQ5JWF2 1037 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 ATAD3CQ5T2N8 411 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 LAIR1Q6GTX8 287 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 LRRC8DQ7L1W4 858 aa15.22■□□□□ 0.03
SSR4-206ENST00000460616 REXO4Q9GZR2 422 aaKnown RBP15.22■□□□□ 0.03
SSR4-206ENST00000460616 CYP4B1P13584 511 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 PRKCAP17252 672 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 AKAP5P24588 427 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 IGFBP5P24593 272 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 S100A5P33763 92 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 UGT2B10P36537 528 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 CPT1AP50416 773 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 DEFA1P59665 94 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 DEFA3P59666 94 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 RACK1P63244 317 aaKnown RBP15.21■□□□□ 0.03
SSR4-206ENST00000460616 PURAQ00577 322 aaKnown RBP15.21■□□□□ 0.03
SSR4-206ENST00000460616 IL1RL1Q01638 556 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 SMN1Q16637 294 aaKnown RBP15.21■□□□□ 0.03
SSR4-206ENST00000460616 ZNF544Q6NX49 715 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 KDELC1Q6UW63 502 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 CXCL17Q6UXB2 119 aa15.21■□□□□ 0.03
SSR4-206ENST00000460616 DET1Q7L5Y6 550 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms