RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 NUDT4Q9NZJ9 180 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 CFAP20Q9Y6A4 193 aaKnown RBP16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ARHGEF33A8MVX0 844 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 E2F3O00716 465 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 FPGTO14772 594 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 RPS17P08708 135 aaKnown RBP16.46■□□□□ 0.23
NELFCD-201ENST00000460601 SH3BP2P78314 561 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ASPHQ12797 758 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 CLEC6AQ6EIG7 209 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 RAB44Q7Z6P3 723 aaPredicted RBP16.46■□□□□ 0.23
NELFCD-201ENST00000460601 CUZD1Q86UP6 607 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 AMZ2Q86W34 360 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 TMEM145Q8NBT3 493 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 PDPRQ8NCN5 879 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 RHBDF1Q96CC6 855 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 SLC12A9Q9BXP2 914 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ILKAPQ9H0C8 392 aaPredicted RBP16.46■□□□□ 0.23
NELFCD-201ENST00000460601 PCTPQ9UKL6 214 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 SLC17A4Q9Y2C5 497 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ARL2BPQ9Y2Y0 163 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 RAP2CQ9Y3L5 183 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ZFC3H1O60293 1989 aaKnown RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 MGAT4DA6NG13 374 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 EIF3FO00303 357 aaPredicted RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 ZNF195O14628 629 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 APBB3O95704 486 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 MPC1LP0DKB6 136 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 TEAD1P28347 426 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 ZXDAP98168 799 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 DMWDQ09019 674 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 KIAA0895LQ68EN5 471 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 CDK15Q96Q40 435 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 PARVBQ9HBI1 364 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 ABCF3Q9NUQ8 709 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 PTBP2Q9UKA9 531 aaKnown RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 KCNK6Q9Y257 313 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 USH1CQ9Y6N9 552 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 STX16-NPEPL1H3BU86 382 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 CACNB4O00305 520 aaPredicted RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 STX16O14662 325 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 LIN7AO14910 233 aaPredicted RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 GSTM1P09488 218 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 GNPDA1P46926 289 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 RPL14P50914 215 aaKnown RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 FOXA1P55317 472 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 GSTM4Q03013 218 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 CLCQ05315 142 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 IFT88Q13099 833 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 CWF19L1Q69YN2 538 aaKnown RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 RD3Q7Z3Z2 195 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 WDR75Q8IWA0 830 aaKnown RBP16.45■□□□□ 0.22
NELFCD-201ENST00000460601 ANKS4BQ8N8V4 417 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 LMNTD1Q8N9Z9 388 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 OR52B6Q8NGF0 335 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 HM13Q8TCT9 377 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 ASB12Q8WXK4 309 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 PYCR2Q96C36 320 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 KCNA7Q96RP8 456 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 NRTNQ99748 197 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 OSGEPL1Q9H4B0 414 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 KLC4Q9NSK0 619 aa16.45■□□□□ 0.22
NELFCD-201ENST00000460601 CACNA1IQ9P0X4 2223 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 C17orf113A0A1B0GUU1 675 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 PRSS38A1L453 326 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 ZNF217O75362 1048 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 PSIP1O75475 530 aaKnown RBP16.44■□□□□ 0.22
NELFCD-201ENST00000460601 C8GP07360 202 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 RPS9P46781 194 aaKnown RBP16.44■□□□□ 0.22
NELFCD-201ENST00000460601 ARFIP2P53365 341 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 PFN3P60673 137 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 PDCD2Q16342 344 aaPredicted RBP16.44■□□□□ 0.22
NELFCD-201ENST00000460601 ENPP7Q6UWV6 458 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 ALYREFQ86V81 257 aaKnown RBP16.44■□□□□ 0.22
NELFCD-201ENST00000460601 SLC22A18ASQ8N1D0 253 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 OR13H1Q8NG92 308 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 TSACCQ96A04 125 aaPredicted RBP16.44■□□□□ 0.22
NELFCD-201ENST00000460601 NUF2Q9BZD4 464 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 OR52A5Q9H2C5 316 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 RDH14Q9HBH5 336 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 WWOXQ9NZC7 414 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 ZNF225Q9UK10 706 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 WDR37Q9Y2I8 494 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 GPSM3Q9Y4H4 160 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 KNL1Q8NG31 2342 aa16.44■□□□□ 0.22
NELFCD-201ENST00000460601 K7ESF4 209 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 CCNT2O60583 730 aaKnown RBP16.43■□□□□ 0.22
NELFCD-201ENST00000460601 PRKAA1Q13131 559 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 PYCR3Q53H96 274 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 ANKS6Q68DC2 871 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 NEK10Q6ZWH5 1172 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 OR56A4Q8NGH8 313 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 OR1E3Q8WZA6 343 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 PRR11Q96HE9 360 aaPredicted RBP16.43■□□□□ 0.22
NELFCD-201ENST00000460601 ORAI3Q9BRQ5 295 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 ATG10Q9H0Y0 220 aa16.43■□□□□ 0.22
NELFCD-201ENST00000460601 CARS2Q9HA77 564 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms