RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PCLAFQ15004 111 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 NPTX1Q15818 432 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CDKN3Q16667 212 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 FAM83EQ2M2I3 478 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 HNRNPA1L2Q32P51 320 aaKnown RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 CCDC58Q4VC31 144 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ZNF805Q5CZA5 627 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 KCTD20Q7Z5Y7 419 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 TTC7BQ86TV6 843 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 AKAP14Q86UN6 197 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CCDC197Q8NCU1 140 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 LPGAT1Q92604 370 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 GRAMD1AQ96CP6 724 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CCDC138Q96M89 665 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 FAM161BQ96MY7 647 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 C19orf43Q9BQ61 176 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 C1QTNF1Q9BXJ1 281 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ASB8Q9H765 288 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 SIRPGQ9P1W8 387 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 EPS15L1Q9UBC2 864 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 TNFRSF10DQ9UBN6 386 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 B4GALT6Q9UBX8 382 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 DENND4AQ7Z401 1863 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 TRIOBPQ9H2D6 2365 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 EDDM13A0A1B0GTR0 161 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 H3BQ06 376 aaPredicted RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 TRIM77I1YAP6 450 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 KLF11O14901 512 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 PRNPP04156 253 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 APOA4P06727 396 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 LHCGRP22888 699 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 FMO4P31512 558 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 SPAM1P38567 509 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 CLK3P49761 638 aaKnown RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 HNRNPFP52597 415 aaKnown RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 GPR85P60893 370 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 KCNJ2P63252 427 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 NFATC2Q13469 925 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 LRRC8EQ6NSJ5 796 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 ZNF549Q6P9A3 640 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 ZCCHC23Q6ZST2 131 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 PIGWQ7Z7B1 504 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 GLRX5Q86SX6 157 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 PIM3Q86V86 326 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 C10orf107Q8IVU9 208 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 PHTF2Q8N3S3 785 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 FSTL5Q8N475 847 aaPredicted RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 CCNYL1Q8N7R7 359 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 KDM1BQ8NB78 822 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 OR8H1Q8NGG4 311 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 PMEPA1Q969W9 287 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 NXNL1Q96CM4 212 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 AARSD1Q9BTE6 412 aaKnown RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 PITHD1Q9GZP4 211 aaPredicted RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 SP140LQ9H930 580 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 IL26Q9NPH9 171 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 MRPL39Q9NYK5 338 aaKnown RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 MALT1Q9UDY8 824 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 MID2Q9UJV3 735 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 RNF112Q9ULX5 631 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 FAM50BQ9Y247 325 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 STARD13Q9Y3M8 1113 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 USP15Q9Y4E8 981 aaPredicted RBP10.21□□□□□ -0.77
HERC4-207ENST00000460168 ANGPTL3Q9Y5C1 460 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 PCDHGA3Q9Y5H0 932 aa10.21□□□□□ -0.77
HERC4-207ENST00000460168 SCN8AQ9UQD0 1980 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 TMEM265A0A087WTH1 108 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 UPK3BL1B0FP48 263 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 UPK3BL2E5RIL1 263 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 OR1I1O60431 355 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 RHOBTB1O94844 696 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 LTA4HP09960 611 aaKnown RBP10.21□□□□□ -0.78
HERC4-207ENST00000460168 CYP2A6P11509 494 aaPredicted RBP10.21□□□□□ -0.78
HERC4-207ENST00000460168 HPGDP15428 266 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 ZNF30P17039 623 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 FDXRP22570 491 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 GRIA2P42262 883 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 PTGER3P43115 390 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 MASP1P48740 699 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 LIMK1P53667 647 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 NCALDP61601 193 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 VBP1P61758 197 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 PTSQ03393 145 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 BST1Q10588 318 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 ELAVL3Q14576 367 aaKnown RBP10.21□□□□□ -0.78
HERC4-207ENST00000460168 OR7E24Q6IFN5 339 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 ANGPTL8Q6UXH0 198 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 CERS6Q6ZMG9 384 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 OTOAQ7RTW8 1153 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 SNX20Q7Z614 316 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 STK40Q8N2I9 435 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 RAB3IL1Q8TBN0 382 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 CSGALNACT1Q8TDX6 532 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 OR8D1Q8WZ84 308 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 SUSD6Q92537 303 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 DGCR14Q96DF8 476 aaKnown RBP10.21□□□□□ -0.78
HERC4-207ENST00000460168 CHFRQ96EP1 664 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 CNDP1Q96KN2 507 aa10.21□□□□□ -0.78
HERC4-207ENST00000460168 ZDHHC4Q9NPG8 344 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms