RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 AMZ1Q400G9 498 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 CDCP2Q5VXM1 449 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 B3GNT8Q7Z7M8 397 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 ZC3HC1Q86WB0 502 aaKnown RBP12.51□□□□□ -0.41
COL18A1-206ENST00000459895 CPNE9Q8IYJ1 553 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 ASZ1Q8WWH4 475 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 VPS39Q96JC1 886 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 GFM1Q96RP9 751 aaKnown RBP12.51□□□□□ -0.41
COL18A1-206ENST00000459895 NRTNQ99748 197 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 KIR3DX1Q9H7L2 352 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 RDH14Q9HBH5 336 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 TMEM9Q9P0T7 183 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 CORO1CQ9ULV4 474 aaPredicted RBP12.51□□□□□ -0.41
COL18A1-206ENST00000459895 NFS1Q9Y697 457 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 COMMD10Q9Y6G5 202 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 FAM95CA0A1B0GW59 222 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 B4GAT1O43505 415 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 DUX1O43812 170 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 SLCO2B1O94956 709 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 CHRM3P20309 590 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 GPR3P46089 330 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 GFERP55789 205 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 PPP1CAP62136 330 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 VSNL1P62760 191 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 CFHR1Q03591 330 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 ZNF460Q14592 562 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 ACSBG2Q5FVE4 666 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 HECTD2Q5U5R9 776 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 FAM45BPQ6NSW5 357 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 RBM44Q6ZP01 1051 aaKnown RBP12.5□□□□□ -0.41
COL18A1-206ENST00000459895 ERMP1Q7Z2K6 904 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 PIWIL4Q7Z3Z4 852 aaKnown RBP12.5□□□□□ -0.41
COL18A1-206ENST00000459895 CTAGE3PQ8IX95 158 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 RBM12BQ8IXT5 1001 aaKnown RBP12.5□□□□□ -0.41
COL18A1-206ENST00000459895 OR52E1Q8NGJ3 308 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 FAM45AQ8TCE6 357 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 CDKL2Q92772 493 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 ELMO2Q96JJ3 720 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 RBBP8Q99708 897 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 RHOJQ9H4E5 214 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 ACSS3Q9H6R3 686 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 NSMCE4AQ9NXX6 385 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 CIDEBQ9UHD4 219 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 SLC24A2Q9UI40 661 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 TRMT6Q9UJA5 497 aaKnown RBP12.5□□□□□ -0.41
COL18A1-206ENST00000459895 PLAGL1Q9UM63 463 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 ASF1AQ9Y294 204 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 HEBP2Q9Y5Z4 205 aa12.5□□□□□ -0.41
COL18A1-206ENST00000459895 MN1Q10571 1320 aaPredicted RBP12.5□□□□□ -0.41
COL18A1-206ENST00000459895 KPNA5O15131 536 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 CSO75390 466 aaKnown RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TCEA3O75764 348 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 FAM155BO75949 473 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 CDK4P11802 303 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 MCM3P25205 808 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 CD1CP29017 333 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 PHBP35232 272 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 GP5P40197 560 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 PPM1FP49593 454 aaPredicted RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 LIMK2P53671 638 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 GPLD1P80108 840 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 E2F1Q01094 437 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 PLOD1Q02809 727 aaPredicted RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 NAB1Q13506 487 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TTLL9Q3SXZ7 439 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TMPRSS7Q7RTY8 843 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 SLITRK4Q8IW52 837 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 DCUN1D3Q8IWE4 304 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 DCBLD1Q8N8Z6 715 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 OR10G6Q8NH81 332 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 OR5K2Q8NHB8 316 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 SKA2Q8WVK7 121 aaPredicted RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TFGQ92734 400 aaPredicted RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 SH3KBP1Q96B97 665 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 DEPDC7Q96QD5 511 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 CPNE1Q99829 537 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 FUT8Q9BYC5 575 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TXLNGYQ9BZA5 131 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 ABCG4Q9H172 646 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 EPB41L4BQ9H329 900 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 TRIT1Q9H3H1 467 aaKnown RBP12.49□□□□□ -0.41
COL18A1-206ENST00000459895 MVB12BQ9H7P6 319 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 ICKQ9UPZ9 632 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 CLCA2Q9UQC9 943 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 ASPMQ8IZT6 3477 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 SPTBN2O15020 2390 aa12.49□□□□□ -0.41
COL18A1-206ENST00000459895 PMS2P1A4D2B8 440 aa12.48□□□□□ -0.41
COL18A1-206ENST00000459895 UBXN7O94888 489 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms