RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CASS4Q9NQ75 786 aa9.74□□□□□ -0.85
HDLBP-228ENST00000459788 FGF21Q9NSA1 209 aa9.74□□□□□ -0.85
HDLBP-228ENST00000459788 WDR70Q9NW82 654 aa9.74□□□□□ -0.85
HDLBP-228ENST00000459788 HEMK1Q9Y5R4 338 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-228ENST00000459788 FER1L5A0AVI2 2057 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 MED13Q9UHV7 2174 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 OR6C74A6NCV1 312 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 CPNE3O75131 537 aaKnown RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 KIAA0754O94854 1291 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 POLBP06746 335 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 HBQ1P09105 142 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 TPH1P17752 444 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 SHMT2P34897 504 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 NPY2RP49146 381 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 LMAN1P49257 510 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 POLE2P56282 527 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 SH3BP2P78314 561 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 TMPRSS15P98073 1019 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 KCNAB2Q13303 367 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 SEPT6Q14141 434 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 DNAJC21Q5F1R6 531 aaKnown RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 TSTD2Q5T7W7 516 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 PPP1R21Q6ZMI0 780 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 ZNF517Q6ZMY9 492 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 LRRC8AQ8IWT6 810 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 PIANPQ8IYJ0 282 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 TBC1D21Q8IYX1 336 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 OR52K1Q8NGK4 314 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 OR13J1Q8NGT2 312 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 OR4L1Q8NH43 312 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 JPH3Q8WXH2 748 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 TFGQ92734 400 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 ZNF501Q96CX3 271 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 FERD3LQ96RJ6 166 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 CARD6Q9BX69 1037 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 IL22Q9GZX6 179 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 FAM96AQ9H5X1 160 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 MRM3Q9HC36 420 aaKnown RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 LHX9Q9NQ69 397 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 RAB6BQ9NRW1 208 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 KCND1Q9NSA2 647 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 SMARCAL1Q9NZC9 954 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 OR6C2Q9NZP2 312 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 LNPEPQ9UIQ6 1025 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 POLHQ9Y253 713 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 MRFAP1Q9Y605 127 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
HDLBP-228ENST00000459788 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
HDLBP-228ENST00000459788 CCDC88CQ9P219 2028 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 HEATR5BQ9P2D3 2071 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 A0A0U1RQJ8 604 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 SLC5A10A0PJK1 596 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CCDC162PA2VCL2 907 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 C2orf74A8MZ97 194 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 KPNA5O15131 536 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CREG1O75629 220 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 FKBP9O95302 570 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 IFNB1P01574 187 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 RPN2P04844 631 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CD63P08962 238 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 RAB40ALP0C0E4 278 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 FOLR1P15328 257 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ZNF28P17035 718 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CDH3P22223 829 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ACADLP28330 430 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 PRDX3P30048 256 aaKnown RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 DLSTP36957 453 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 TTPAP49638 278 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CDKN1CP49918 316 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 KPNA2P52292 529 aaKnown RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 DNASE1L3Q13609 305 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 SIX1Q15475 284 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 PCID2Q5JVF3 399 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 IZUMO3Q5VZ72 239 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 PWWP2BQ6NUJ5 590 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ATG14Q6ZNE5 492 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 AMIGO1Q86WK6 493 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 LRRC6Q86X45 466 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 APLFQ8IW19 511 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CLDN19Q8N6F1 224 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 GALNT6Q8NCL4 622 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 PPHLN1Q8NEY8 458 aaKnown RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 OR4E2Q8NGC2 313 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 OR5K2Q8NHB8 316 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ASZ1Q8WWH4 475 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 THAP4Q8WY91 577 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ATG4AQ8WYN0 398 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CPT1BQ92523 772 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 C17orf62Q9BQA9 187 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 IL17BQ9UHF5 180 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ANAPC5Q9UJX4 755 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 ANAPC2Q9UJX6 822 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CROTQ9UKG9 612 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 TCAF1Q9Y4C2 921 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 CFAP20Q9Y6A4 193 aaKnown RBP9.72□□□□□ -0.85
HDLBP-228ENST00000459788 FLNCQ14315 2725 aa9.72□□□□□ -0.85
HDLBP-228ENST00000459788 NUP210LQ5VU65 1888 aa9.71□□□□□ -0.85
HDLBP-228ENST00000459788 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PFDN6O15212 129 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms