RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PGGT1BP53609 377 aa8.78□□□□□ -1
VPS50-207ENST00000458530 COPAP53621 1224 aa8.78□□□□□ -1
VPS50-207ENST00000458530 IFT88Q13099 833 aa8.78□□□□□ -1
VPS50-207ENST00000458530 SRSF5Q13243 272 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 SGCGQ13326 291 aa8.78□□□□□ -1
VPS50-207ENST00000458530 OR4D1Q15615 310 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TSNQ15631 228 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 TBCCQ15814 346 aa8.78□□□□□ -1
VPS50-207ENST00000458530 MAP7D1Q3KQU3 841 aa8.78□□□□□ -1
VPS50-207ENST00000458530 BCL7AQ4VC05 210 aa8.78□□□□□ -1
VPS50-207ENST00000458530 SEL1L3Q68CR1 1132 aa8.78□□□□□ -1
VPS50-207ENST00000458530 ANKS6Q68DC2 871 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TTC23LQ6PF05 361 aa8.78□□□□□ -1
VPS50-207ENST00000458530 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.78□□□□□ -1
VPS50-207ENST00000458530 PRR23BQ6ZRT6 265 aa8.78□□□□□ -1
VPS50-207ENST00000458530 RFLNAQ6ZTI6 216 aa8.78□□□□□ -1
VPS50-207ENST00000458530 FRMD7Q6ZUT3 714 aa8.78□□□□□ -1
VPS50-207ENST00000458530 WDR5BQ86VZ2 330 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TMPRSS6Q8IU80 811 aa8.78□□□□□ -1
VPS50-207ENST00000458530 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TCAIMQ8N3R3 496 aa8.78□□□□□ -1
VPS50-207ENST00000458530 CHCHD4Q8N4Q1 142 aa8.78□□□□□ -1
VPS50-207ENST00000458530 AADATQ8N5Z0 425 aa8.78□□□□□ -1
VPS50-207ENST00000458530 CLDN19Q8N6F1 224 aa8.78□□□□□ -1
VPS50-207ENST00000458530 PTGR2Q8N8N7 351 aaPredicted RBP8.78□□□□□ -1
VPS50-207ENST00000458530 PNPLA1Q8N8W4 532 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GIMAP7Q8NHV1 300 aa8.78□□□□□ -1
VPS50-207ENST00000458530 ELMO1Q92556 727 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GATA6Q92908 595 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GLMNQ92990 594 aa8.78□□□□□ -1
VPS50-207ENST00000458530 FUBP1Q96AE4 644 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 TMEM159Q96B96 161 aa8.78□□□□□ -1
VPS50-207ENST00000458530 SIPA1Q96FS4 1042 aa8.78□□□□□ -1
VPS50-207ENST00000458530 HIC2Q96JB3 615 aa8.78□□□□□ -1
VPS50-207ENST00000458530 FOPNLQ96NB1 174 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TUBB6Q9BUF5 446 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TMEM120AQ9BXJ8 343 aa8.78□□□□□ -1
VPS50-207ENST00000458530 UNKQ9C0B0 810 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 ACTR5Q9H9F9 607 aaPredicted RBP8.78□□□□□ -1
VPS50-207ENST00000458530 RDH14Q9HBH5 336 aa8.78□□□□□ -1
VPS50-207ENST00000458530 POLMQ9NP87 494 aaPredicted RBP8.78□□□□□ -1
VPS50-207ENST00000458530 C2orf42Q9NWW7 574 aa8.78□□□□□ -1
VPS50-207ENST00000458530 HAO1Q9UJM8 370 aa8.78□□□□□ -1
VPS50-207ENST00000458530 DCTN4Q9UJW0 460 aa8.78□□□□□ -1
VPS50-207ENST00000458530 MMP17Q9ULZ9 603 aa8.78□□□□□ -1
VPS50-207ENST00000458530 NDRG2Q9UN36 371 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 OARD1Q9Y530 152 aa8.78□□□□□ -1
VPS50-207ENST00000458530 PRSS21Q9Y6M0 314 aa8.78□□□□□ -1
VPS50-207ENST00000458530 SPAG17Q6Q759 2223 aa8.78□□□□□ -1
VPS50-207ENST00000458530 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
VPS50-207ENST00000458530 ASH1LQ9NR48 2969 aaKnown RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 IGSF10Q6WRI0 2623 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CCDC163A0A0D9SF12 145 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 TMEM8BA6NDV4 472 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 IQCF5A8MTL0 148 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 UBXN8O00124 270 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CDC7O00311 574 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 PLK4O00444 970 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 LIN7AO14910 233 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 HDAC3O15379 428 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 KLK8O60259 260 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 HNRNPCL1O60812 293 aaKnown RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 LYPLA1O75608 230 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 ATP5HO75947 161 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 SUPT7LO94864 414 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CDK14O94921 469 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 EPN2O95208 641 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 HIST1H2AGP0C0S8 130 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 KITP10721 976 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 ALOX15P16050 662 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 GM2AP17900 193 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 ITGB6P18564 788 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 HIST1H2ADP20671 130 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 PIK3CGP48736 1102 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 METAP1P53582 386 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 AQP5P55064 265 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 AP1S2P56377 157 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CDKL1Q00532 357 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 B4GALNT1Q00973 533 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 TMEM115Q12893 351 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 BOP1Q14137 746 aaKnown RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 SF3A2Q15428 464 aaKnown RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 TGFBIQ15582 683 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 ARL13AQ5H913 290 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 ZNF678Q5SXM1 525 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 STPG1Q5TH74 334 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 SULT1C3Q6IMI6 304 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 KIAA1324Q6UXG2 1013 aaKnown RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 ACAD11Q709F0 780 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 DET1Q7L5Y6 550 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CACUL1Q86Y37 369 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 PDPRQ8NCN5 879 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 OR14C36Q8NHC7 312 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 RPLP0P6Q8NHW5 317 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 ASB12Q8WXK4 309 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 EZH1Q92800 747 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 FAM131CQ96AQ9 280 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms