RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 FAM183BPQ6ZVS7 135 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 USP45Q70EL2 814 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 RAB11FIP2Q7L804 512 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC26A9Q7LBE3 791 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 RRM2BQ7LG56 351 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 POLNQ7Z5Q5 900 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 CDH24Q86UP0 819 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 NOXA1Q86UR1 476 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 CDKL3Q8IVW4 592 aaPredicted RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 KATNAL2Q8IYT4 538 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 KYQ8NBH2 561 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC24A4Q8NFF2 622 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 ABHD11Q8NFV4 315 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 JOSD2Q8TAC2 188 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 HEXDCQ8WVB3 486 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 DNAJA4Q8WW22 397 aaPredicted RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 KCTD13Q8WZ19 329 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 GTF2H4Q92759 462 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 ATOH1Q92858 354 aaPredicted RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 TMIGD2Q96BF3 282 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 DUS3LQ96G46 650 aaKnown RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 PIWIL1Q96J94 861 aaKnown RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 FEM1CQ96JP0 617 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 FOPNLQ96NB1 174 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 GCNAQ96QF7 691 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 GAS2L1Q99501 681 aaPredicted RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 HINFPQ9BQA5 517 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 ACBD6Q9BR61 282 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 TMEM175Q9BSA9 504 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 DUSP16Q9BY84 665 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 MLXIPLQ9NP71 852 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 NUDT15Q9NV35 164 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 GDE1Q9NZC3 331 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 TSR3Q9UJK0 312 aaKnown RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 TNPO3Q9Y5L0 923 aaKnown RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 HEMK1Q9Y5R4 338 aaPredicted RBP6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 FKBP7Q9Y680 259 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 HSPE1-MOB4S4R3N1 261 aa6.73□□□□□ -1.33
CUBNP3-201ENST00000457461 A0A1W2PPW3 197 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 A8MU76 341 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 H0YIV9 168 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TSPAN4O14817 238 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SMAD6O43541 496 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PLOD3O60568 738 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CST8O60676 142 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 IPO13O94829 963 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OAZ2O95190 189 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TSPAN12O95859 305 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OPN1LWP04000 364 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PROS1P07225 676 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 RBP1P09455 135 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PRG2P13727 222 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PTPN7P35236 360 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CAPZA2P47755 286 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SOX9P48436 509 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 KCNJ5P48544 419 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PSMD8P48556 350 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 DNA2P51530 1060 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CCL23P55773 120 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TAS2R40P59535 323 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC25A11Q02978 314 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CAV1Q03135 178 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 DBPQ10586 325 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TRAF2Q12933 501 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PUM1Q14671 1186 aaKnown RBP eCLIP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 STAT4Q14765 748 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZNF169Q14929 603 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SIX1Q15475 284 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CYP1B1Q16678 543 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 INTS6LQ5JSJ4 861 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FGD3Q5JSP0 725 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 RAB41Q5JT25 222 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 HMBOX1Q6NT76 420 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MZT2AQ6P582 158 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 DCUN1D2Q6PH85 259 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SUSD1Q6UWL2 747 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 LYPD8Q6UX82 237 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 KIAA1324Q6UXG2 1013 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CLEC20AQ6ZU45 233 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FJX1Q86VR8 437 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 RHOT1Q8IXI2 618 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FAM217AQ8IXS0 508 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TCTE3Q8IZS6 198 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CYP4Z2PQ8N1L4 340 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC43A2Q8N370 569 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MFSD4AQ8N468 514 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PACRGLQ8N7B6 248 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OR10T2Q8NGX3 314 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TCEAL3Q969E4 200 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TRIM43Q96BQ3 446 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 C9orf72Q96LT7 481 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CSPG4P5Q96PW8 444 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 C11orf84Q9BUA3 381 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 NPLQ9BXD5 320 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 B3GNT5Q9BYG0 378 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SHARPINQ9H0F6 387 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms