RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 NFKBIL1Q9UBC1 381 aaPredicted RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 CNOT8Q9UFF9 292 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 TBC1D29Q9UFV1 150 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 ST6GALNAC2Q9UJ37 374 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 INTUQ9ULD6 942 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 NEU2Q9Y3R4 380 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 PCDHB4Q9Y5E5 795 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 ACTL7AQ9Y615 435 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 TRAV17A0A0B4J275 112 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 MYOCOSA0A1B0GUC4 107 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 E9PLN8 166 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 PEX12O00623 359 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 LRIG2O94898 1065 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 YEATS4O95619 227 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 HOXD4P09016 255 aaPredicted RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 EPB41P11171 864 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 CYP2A6P11509 494 aaPredicted RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 FOLR1P15328 257 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 FDXRP22570 491 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 HNRNPH3P31942 346 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SPAM1P38567 509 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 HSD11B2P80365 405 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SRSF3P84103 164 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 TFF3Q07654 80 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SLBPQ14493 270 aaKnown RBP eCLIP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SEPT7Q16181 437 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 KRTCAP3Q53RY4 240 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM201Q5SNT2 666 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM198Q66K66 360 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 KLHL35Q6PF15 583 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SHC4Q6S5L8 630 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 GFRALQ6UXV0 394 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 PPP1R32Q7Z5V6 425 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SRLQ86TD4 932 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 CREBRFQ8IUR6 639 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 CEP97Q8IW35 865 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 EID3Q8N140 333 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 RTL3Q8N8U3 475 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SLC38A9Q8NBW4 561 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 OR2Y1Q8NGV0 311 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 ZNF606Q8WXB4 792 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SLC35C1Q96A29 364 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 INTS4Q96HW7 963 aaKnown RBP2.06□□□□□ -2.08
NEDD1-204ENST00000457368 CPXM1Q96SM3 734 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 VKORC1Q9BQB6 163 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SARGQ9BW04 601 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 SIK2Q9H0K1 926 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 EXOC1Q9NV70 894 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 GPATCH2Q9NW75 528 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 P4HTMQ9NXG6 502 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 FAM53CQ9NYF3 392 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 ACTR10Q9NZ32 417 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 B4GALT6Q9UBX8 382 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 DNPEPQ9ULA0 475 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 MEMO1Q9Y316 297 aa2.06□□□□□ -2.08
NEDD1-204ENST00000457368 CSMD1Q96PZ7 3565 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 TRGV8A0A0C4DH27 118 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 FAM237AA0A1B0GTK4 181 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 TRIM49BA6NDI0 452 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 C9J4A7 227 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CHUKO15111 745 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CETN3O15182 167 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 TEX33O43247 280 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 PROM1O43490 865 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 BUB1O43683 1085 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 PRAMEF11O60813 436 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 SCRG1O75711 98 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 PIGNO95427 931 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 ZBTB11O95625 1053 aaPredicted RBP2.05□□□□□ -2.08
NEDD1-204ENST00000457368 KRT1P04264 644 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 NAT2P11245 290 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 ZNF30P17039 623 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 HOXC12P31275 282 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 HSPA9P38646 679 aaKnown RBP2.05□□□□□ -2.08
NEDD1-204ENST00000457368 PEX19P40855 299 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 POLD2P49005 469 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CDKN1CP49918 316 aaPredicted RBP2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CLCN7P51798 805 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CTSCP53634 463 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CASP6P55212 293 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 KCNK10P57789 538 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 DEUP1Q05D60 604 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 DMPKQ09013 629 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 NFATC2Q13469 925 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 ACOX1Q15067 660 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CDSNQ15517 529 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 GRAMD1BQ3KR37 738 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CT47A1Q5JQC4 288 aaPredicted RBP2.05□□□□□ -2.08
NEDD1-204ENST00000457368 LRRC73Q5JTD7 316 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 TMTC4Q5T4D3 741 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 SHEQ5VZ18 495 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CES4AQ5XG92 561 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 FAM199XQ6PEV8 388 aaPredicted RBP2.05□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM207Q6UWW9 146 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CLEC9AQ6UXN8 241 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 FAM183BPQ6ZVS7 135 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 STRADAQ7RTN6 431 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 HSD11B1LQ7Z5J1 315 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 ZNF761Q86XN6 746 aaPredicted RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms