RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NLE1Q9NVX2 485 aaPredicted RBP12.21□□□□□ -0.46
LINC00959-201ENST00000456581 NOTCH4Q99466 2003 aa12.21□□□□□ -0.46
LINC00959-201ENST00000456581 LTBP2Q14767 1821 aa12.21□□□□□ -0.46
LINC00959-201ENST00000456581 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.46
LINC00959-201ENST00000456581 BBIP1A8MTZ0 92 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 SLC22A3O75751 556 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 CXCL14O95715 111 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 C1QCP02747 245 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 C8AP07357 584 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 CD70P32970 193 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 PIGAP37287 484 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 CTSOP43234 321 aaPredicted RBP12.2□□□□□ -0.46
LINC00959-201ENST00000456581 STK19P49842 368 aaPredicted RBP12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ATP4BP51164 291 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ERVFC1P60507 584 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 LSM3P62310 102 aaKnown RBP12.2□□□□□ -0.46
LINC00959-201ENST00000456581 AQP6Q13520 282 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 RCAN2Q14206 197 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 NKG7Q16617 165 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TMTC4Q5T4D3 741 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 Q6ZNB5 142 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 FBXO30Q8TB52 745 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 HGH1Q9BTY7 390 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ALOXE3Q9BYJ1 711 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 GID8Q9NWU2 228 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 COQ6Q9Y2Z9 468 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TRIM64CA6NLI5 447 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 A8MU76 341 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 B3GALT4O96024 378 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 LDLRP01130 860 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 FGF4P08620 206 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 IDO1P14902 403 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 NFKBIAP25963 317 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 MC4RP32245 332 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TGFBR1P36897 503 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 C21orf59P57076 290 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 PTPRNQ16849 979 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 SLC44A4Q53GD3 710 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ZRANB3Q5FWF4 1079 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 PERM1Q5SV97 790 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 GLYATQ6IB77 296 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 STK32CQ86UX6 486 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ALDH16A1Q8IZ83 802 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 CMTM8Q8IZV2 173 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 PROKR1Q8TCW9 393 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 EEF1AKMT1Q8WVE0 214 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TMBIM1Q969X1 311 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 CEP295NLQ96MC4 621 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 NEURL2Q9BR09 285 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 AARSD1Q9BTE6 412 aaKnown RBP12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TBCDQ9BTW9 1192 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 SLC46A2Q9BY10 475 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 TRIM15Q9C019 465 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 ZBP1Q9H171 429 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 IKZF5Q9H5V7 419 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 C11orf49Q9H6J7 331 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 AIG1Q9NVV5 245 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 FBXO10Q9UK96 956 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 SH3GLB1Q9Y371 365 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 DNAH14Q0VDD8 3507 aa12.2□□□□□ -0.46
LINC00959-201ENST00000456581 G6PDP11413 515 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 ITGB6P18564 788 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 DCKP27707 260 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 BNIP2Q12982 314 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 MTA1Q13330 715 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 SPCS2Q15005 226 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 MEP1AQ16819 746 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 LETMD1Q6P1Q0 360 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 NCEH1Q6PIU2 408 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 CLEC4FQ8N1N0 589 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 PSD4Q8NDX1 1056 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 FIG4Q92562 907 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 RHNO1Q9BSD3 238 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 LRRC3Q9BY71 257 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 ZMYM5Q9UJ78 669 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 INTS6Q9UL03 887 aaKnown RBP12.19□□□□□ -0.46
LINC00959-201ENST00000456581 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 U3KQV3 271 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 DENND4CQ5VZ89 1909 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 PRUNE2Q8WUY3 3088 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 C2orf81A6NN90 581 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 UPK1AO00322 258 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 HTR1AP08908 422 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 MAP4P27816 1152 aaKnown RBP12.19□□□□□ -0.46
LINC00959-201ENST00000456581 IDUAP35475 653 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 PTGR1Q14914 329 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
LINC00959-201ENST00000456581 CARTPTQ16568 116 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 C16orf87Q6PH81 154 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 TMEM199Q8N511 208 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 PAF1Q8N7H5 531 aa12.19□□□□□ -0.46
LINC00959-201ENST00000456581 HJURPQ8NCD3 748 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms