RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SPAM1P38567 509 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 GNPDA1P46926 289 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ARSFP54793 590 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 SMAD3P84022 425 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ZNF33BQ06732 778 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 BCL2L1Q07817 233 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 PLD1Q13393 1074 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 BOP1Q14137 746 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 RUNDC3AQ59EK9 446 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 GPR180Q86V85 440 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 IFNEQ86WN2 208 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 NXPE1Q8N323 547 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ZNF786Q8N393 782 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 TCAIMQ8N3R3 496 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 PJA1Q8NG27 643 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 LKAAEAR1Q8TD35 194 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 TBC1D20Q96BZ9 403 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 AURKBQ96GD4 344 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 NPLQ9BXD5 320 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 HIPK3Q9H422 1215 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 NSUN3Q9H649 340 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ASB8Q9H765 288 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 SARS2Q9NP81 518 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 TLR9Q9NR96 1032 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 KCTD5Q9NXV2 234 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 PKD2L2Q9NZM6 624 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 OPTCQ9UBM4 332 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 DNAJB9Q9UBS3 223 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 POLR3HQ9Y535 204 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 LTBP2Q14767 1821 aa12.28□□□□□ -0.44
ECHDC1-209ENST00000454591 GLYATL1P3A0A0U1RQE8 302 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 A0A1B0GVG6 124 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 FAM220BPB1ANY3 271 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 MANBAO00462 879 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 TPST1O60507 370 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ERN1O75460 977 aaKnown RBP12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 SLC25A14O95258 325 aaPredicted RBP12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ALPLP05186 524 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 IRF1P10914 325 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 PFKLP17858 780 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 HSPA7P48741 367 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 CHRNB3Q05901 458 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 DCTN2Q13561 401 aaKnown RBP12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 SELPLGQ14242 412 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 PTPRRQ15256 657 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 FUT11Q495W5 492 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 USP39Q53GS9 565 aaKnown RBP12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ZDHHC20Q5W0Z9 365 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 TPGS1Q6ZTW0 290 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 HTR3DQ70Z44 454 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 NECAB2Q7Z6G3 386 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 RASGRP3Q8IV61 690 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ITFG1Q8TB96 612 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 WFDC5Q8TCV5 224 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 VOPP1Q96AW1 172 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ISOC1Q96CN7 298 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ECHDC3Q96DC8 303 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 MAGEB10Q96LZ2 347 aaPredicted RBP12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 TRIM8Q9BZR9 551 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ATP13A3Q9H7F0 1226 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ZDHHC3Q9NYG2 299 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 PRSS21Q9Y6M0 314 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 ANKRD12Q6UB98 2062 aa12.27□□□□□ -0.44
ECHDC1-209ENST00000454591 HELZP42694 1942 aaKnown RBP12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CROCCQ5TZA2 2017 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 C1orf232A0A0U1RR37 186 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 GMNNO75496 209 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 IGSF6O95976 241 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 ALBP02768 609 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CNPP09543 421 aaKnown RBP12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 ALPIP09923 528 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 MPC1LP0DKB6 136 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 THRBP10828 461 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 PRPS2P11908 318 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 SLC2A4P14672 509 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 EPB42P16452 691 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CTPS1P17812 591 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CA5AP35218 305 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 NSG1P42857 185 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 GZMMP51124 257 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 EPHB3P54753 998 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 EMP3P54852 163 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CDH15P55291 814 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 SLC7A9P82251 487 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CYP4F3Q08477 520 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 CDH18Q13634 790 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 TUBA3CQ13748 450 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 TAF12Q16514 161 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 PHKG1Q16816 387 aa12.27□□□□□ -0.45
ECHDC1-209ENST00000454591 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms