RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 HTR1BP28222 390 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 NUDT1P36639 197 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 GABPB1Q06547 395 aaPredicted RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PCLAFQ15004 111 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 SEPT7Q16181 437 aaKnown RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PPP1R3AQ16821 1122 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 ZXDCQ2QGD7 858 aaPredicted RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 ZNF528Q3MIS6 628 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 LYSMD4Q5XG99 296 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 METRNLQ641Q3 311 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 SBSNQ6UWP8 590 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 MBOAT1Q6ZNC8 495 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 GALNT13Q8IUC8 556 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 SLC22A15Q8IZD6 547 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PHC3Q8NDX5 983 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 CFAP61Q8NHU2 1237 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 EXT2Q93063 718 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 WNT2BQ93097 391 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 ZNF514Q96K75 400 aaPredicted RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 OR2M4Q96R27 311 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 UCN2Q96RP3 112 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PAIP2Q9BPZ3 127 aaKnown RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 ZDHHC5Q9C0B5 715 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 OR52A5Q9H2C5 316 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 CNOT10Q9H9A5 744 aaKnown RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 ZSCAN32Q9NX65 697 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 UTP6Q9NYH9 597 aaKnown RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PCDHB3Q9Y5E6 796 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 CFAP20Q9Y6A4 193 aaKnown RBP10.74□□□□□ -0.69
SCN9A-205ENST00000454569 R4GN57 208 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 PATE3B3GLJ2 98 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 QSOX1O00391 747 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TNFRSF10CO14798 259 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 BCAT2O15382 392 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 DLX3O60479 287 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ZWINTO95229 277 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 MATN4O95460 622 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ACADLP28330 430 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ALDH3A1P30838 453 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SLC26A3P40879 764 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SLC18A1P54219 525 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 NXPH1P58417 271 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ILF2Q12905 390 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 CLCA4Q14CN2 919 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ACAP2Q15057 778 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 FAM83EQ2M2I3 478 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 AGAP9Q5VTM2 703 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 DUS1LQ6P1R4 473 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 RPS27LQ71UM5 84 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 C10orf107Q8IVU9 208 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 HM13Q8TCT9 377 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ASZ1Q8WWH4 475 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ASB11Q8WXH4 323 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 KIAA1191Q96A73 305 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ESAMQ96AP7 390 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ZC3H10Q96K80 434 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 RMDN2Q96LZ7 410 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 WWP1Q9H0M0 922 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TFB2MQ9H5Q4 396 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 RMI1Q9H9A7 625 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 PRDM8Q9NQV8 689 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 KLHL42Q9P2K6 505 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TBC1D29Q9UFV1 150 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ASB1Q9Y576 335 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 DNMT3AQ9Y6K1 912 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SPEGQ15772 3267 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 HEATR5BQ9P2D3 2071 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TRBV23OR9-2A0A075B6M9 112 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 NCF1BA6NI72 391 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 NCF1CA8MVU1 366 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ARHGEF33A8MVX0 844 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 PRR33A8MZF0 331 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 GPR89AB7ZAQ6 455 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 GFYI3L273 518 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TOR1BO14657 336 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 LIN7AO14910 233 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 VILLO15195 856 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TM9SF1O15321 606 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SNX2O60749 519 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 GPR89BP0CG08 455 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TPBGLP0DKB5 382 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 MPC1LP0DKB6 136 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 NCF1P14598 390 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 KELP23276 732 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ARRB2P32121 409 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SOX11P35716 441 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 CCR10P46092 362 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 BDKRB1P46663 353 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SERPINB4P48594 390 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 DMPKQ09013 629 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SIM2Q14190 667 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 CCDC6Q16204 474 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TSNAXIP1Q2TAA8 658 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 KIF19Q2TAC6 998 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SYTL3Q4VX76 610 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms