RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZZEF1O43149 2961 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 HGFP14210 728 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ATP5DP30049 168 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ETV5P41161 510 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ELK3P41970 407 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 MAPK9P45984 424 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 EIF3BP55884 814 aaKnown RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 THOC5Q13769 683 aaKnown RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 FASTKD3Q14CZ7 662 aaKnown RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ST3GAL2Q16842 350 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 SYTL3Q4VX76 610 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 PTRHD1Q6GMV3 140 aaKnown RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ZNF449Q6P9G9 518 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 NAPRTQ6XQN6 538 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 UNC5AQ6ZN44 842 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 VRK3Q8IV63 474 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 UNC5BQ8IZJ1 945 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 C2CD4AQ8NCU7 369 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 CALML6Q8TD86 181 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ASZ1Q8WWH4 475 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 NCSTNQ92542 709 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 TFGQ92734 400 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 CERS2Q96G23 380 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 C9orf72Q96LT7 481 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 TFB2MQ9H5Q4 396 aaKnown RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 LATS2Q9NRM7 1088 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 C20orf96Q9NUD7 363 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 SIDT1Q9NXL6 827 aaKnown RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 CHMP2BQ9UQN3 213 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 AK5Q9Y6K8 562 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 COLEC10Q9Y6Z7 277 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 ACACAQ13085 2346 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 CAPN5O15484 640 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 NIPSNAP2O75323 286 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 URI1O94763 535 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 F7P08709 466 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 PKMP14618 531 aaKnown RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 TYRP1P17643 537 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 ITGB6P18564 788 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 ITIH1P19827 911 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 MPSTP25325 297 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 LEPRP48357 1165 aaKnown RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 PPP1CAP62136 330 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 MPP1Q00013 466 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 TUBB2AQ13885 445 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 PLCL1Q15111 1095 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 TMED2Q15363 201 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 PLEKHS1Q5SXH7 462 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 KLHL35Q6PF15 583 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 ZDHHC24Q6UX98 284 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 KIAA0408Q6ZU52 694 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 TBC1D21Q8IYX1 336 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 AGBL5Q8NDL9 886 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 OR52E1Q8NGJ3 308 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 OR5K2Q8NHB8 316 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 KCNJ9Q92806 393 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 CD180Q99467 661 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 ZMYND15Q9H091 742 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 RAB17Q9H0T7 212 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 DPH5Q9H2P9 285 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 ZNF768Q9H5H4 540 aaKnown RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 FBXO6Q9NRD1 293 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-205ENST00000454542 THSD1Q9NS62 852 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 KLHL42Q9P2K6 505 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 FBXO5Q9UKT4 447 aa13.79□□□□□ -0.2
HDAC4-205ENST00000454542 A0A087WV48 116 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-205ENST00000454542 B4E171 279 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 KPNA5O15131 536 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC4-205ENST00000454542 TNFSF15O95150 251 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 APOA4P06727 396 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 FGF3P11487 239 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-205ENST00000454542 AMD1P17707 334 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 FMO4P31512 558 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 TSPAN7P41732 249 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 CALCOCO2Q13137 446 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 CTBP1Q13363 440 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 BRD3Q15059 726 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 ZNF549Q6P9A3 640 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 UNC5DQ6UXZ4 953 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 OOSP2Q86WS3 158 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 CARFQ8N187 725 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 OR5AR1Q8NGP9 310 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 GIMAP7Q8NHV1 300 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 KLHL6Q8WZ60 621 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 ART4Q93070 314 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 HGH1Q9BTY7 390 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 MENTQ9BUN1 341 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 IARS2Q9NSE4 1012 aaKnown RBP13.78□□□□□ -0.2
HDAC4-205ENST00000454542 PISDQ9UG56 409 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 ZC3H7BQ9UGR2 993 aaKnown RBP13.78□□□□□ -0.2
HDAC4-205ENST00000454542 ICKQ9UPZ9 632 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 CRYL1Q9Y2S2 319 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 RAXQ9Y2V3 346 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms