RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 GPRC6AQ5T6X5 926 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 AGAP9Q5VTM2 703 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 TMEM220Q6QAJ8 160 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 AGGF1Q8N302 714 aaeCLIP17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 RASGEF1AQ8N9B8 481 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 OR4K2Q8NGD2 314 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 ZNF398Q8TD17 642 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 EXTL1Q92935 676 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 TGM7Q96PF1 710 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 EBNA1BP2Q99848 306 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 ZPBPQ9BS86 351 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 ACBD3Q9H3P7 528 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 MRM3Q9HC36 420 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 FBXO8Q9NRD0 319 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 SYBUQ9NX95 663 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 SAMD15Q9P1V8 674 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 GCN1Q92616 2671 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 PIEZO2Q9H5I5 2752 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 SDK2Q58EX2 2172 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 PRR19A6NJB7 356 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 MAP2K7O14733 419 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 CAPN5O15484 640 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 RASSF9O75901 435 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 PRAMEF1O95521 474 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 ACSL3O95573 720 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 ITGB2P05107 769 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 PGAM1P18669 254 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 PHBP35232 272 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 CYP4F2P78329 520 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 GPR18Q14330 331 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 TAF1AQ15573 450 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 STEAP4Q687X5 459 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 ANKMY2Q8IV38 441 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 MPP5Q8N3R9 675 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 RANBP9Q96S59 729 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 SLC40A1Q9NP59 571 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 OGFRQ9NZT2 677 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 ZC3H7BQ9UGR2 993 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 WDR37Q9Y2I8 494 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 MAD1L1Q9Y6D9 718 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 DNMT3AQ9Y6K1 912 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 SLC30A1Q9Y6M5 507 aa17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 MN1Q10571 1320 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-204ENST00000453046 GAPDHSO14556 408 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 CRTAMO95727 393 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 C9P02748 559 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 ANKRD34CP0C6C1 535 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 WT1P19544 449 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PBLDP30039 288 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 SEPHS1P49903 392 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 CTSCP53634 463 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PDE1BQ01064 536 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 FOXM1Q08050 763 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 CLCA4Q14CN2 919 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 KYNUQ16719 465 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 CASC4Q6P4E1 433 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 LRIG3Q6UXM1 1119 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 DET1Q7L5Y6 550 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 IGDCC3Q8IVU1 814 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PALM2Q8IXS6 379 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 NLGN4XQ8N0W4 816 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PPHLN1Q8NEY8 458 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 NLGN4YQ8NFZ3 816 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 KIAA1143Q96AT1 154 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 ZNF514Q96K75 400 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 ASB8Q9H765 288 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 LRRC4CQ9HCJ2 640 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 APMAPQ9HDC9 416 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 SMOXQ9NWM0 555 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PIH1D1Q9NWS0 290 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PILRAQ9UKJ1 303 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 SOX13Q9UN79 622 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 PSMD13Q9UNM6 376 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 CFAP46Q8IYW2 2715 aa17.61■□□□□ 0.41
SQSTM1-204ENST00000453046 A0A087WUV0 522 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 FAM237BA0A1B0GVD1 139 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 MAGEB16A2A368 324 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 TOX3O15405 576 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 SRP72O76094 671 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 LIFP15018 202 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 MAP4P27816 1152 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 STX2P32856 288 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 CA5AP35218 305 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 CAPZBP47756 277 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 EIF3BP55884 814 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 DMPKQ09013 629 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 LAMB3Q13751 1172 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 NFE2L1Q14494 772 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 LINC00303Q3SY05 128 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 PCID2Q5JVF3 399 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 HP1BP3Q5SSJ5 553 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 IRGCQ6NXR0 463 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 XKR5Q6UX68 686 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 IQCKQ8N0W5 287 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 GSDMBQ8TAX9 411 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 RSC1A1Q92681 617 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 CFAP36Q96G28 342 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 DCUN1D1Q96GG9 259 aa17.6■□□□□ 0.41
SQSTM1-204ENST00000453046 ZDHHC12Q96GR4 267 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms