RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ACVR1Q04771 509 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 THOC5Q13769 683 aaKnown RBP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 FRG1Q14331 258 aaKnown RBP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 CRYMQ14894 314 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 KYNUQ16719 465 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 LONRF1Q17RB8 773 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 LDLRAP1Q5SW96 308 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 GPRC6AQ5T6X5 926 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 TMEM164Q5U3C3 297 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 STEAP4Q687X5 459 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 TMEM220Q6QAJ8 160 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 AFTPHQ6ULP2 937 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 PCSK4Q6UW60 755 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 CES3Q6UWW8 571 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 UNC5AQ6ZN44 842 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 MICALCLQ6ZW33 695 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 ZNF771Q7L3S4 317 aaPredicted RBP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 VASH2Q86V25 355 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 FAM129CQ86XR2 697 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 AGBL5Q8NDL9 886 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 OR6P1Q8NGX9 317 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 ZNF398Q8TD17 642 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 CALML6Q8TD86 181 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 HDAC10Q969S8 669 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 TAAR9Q96RI9 348 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 SLC39A1Q9NY26 324 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 NINJ2Q9NZG7 142 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 FKBPLQ9UIM3 349 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 ACSL6Q9UKU0 697 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 LOC400499M0QZD8 3231 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 MGAQ8IWI9 3026 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 PRR19A6NJB7 356 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 OR2AG2A6NM03 316 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 OR52A4PA6NMU1 304 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 K7ENP7 123 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 POP7O75817 140 aaKnown RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 XRCC1P18887 633 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 PBLDP30039 288 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 SSTR1P30872 391 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 PPARGP37231 505 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 ARSDP51689 593 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 ZNF449Q6P9G9 518 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 INO80CQ6PI98 192 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 WDR74Q6RFH5 385 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 CAPN12Q6ZSI9 719 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 TMEM26Q6ZUK4 368 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 CYS1Q717R9 158 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 DET1Q7L5Y6 550 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 LMNTD2Q8IXW0 634 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 DDHD1Q8NEL9 900 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 OR13J1Q8NGT2 312 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 DTX3LQ8TDB6 740 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 UBLCP1Q8WVY7 318 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 CDKL2Q92772 493 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 ZNF778Q96MU6 729 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 TTC1Q99614 292 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 TXLNGYQ9BZA5 131 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 ASB8Q9H765 288 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 LRRC4CQ9HCJ2 640 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 C20orf96Q9NUD7 363 aaPredicted RBP16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 PDP2Q9P2J9 529 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 SLC2A6Q9UGQ3 507 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 WDR37Q9Y2I8 494 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 B3GALT1Q9Y5Z6 326 aa16.68■□□□□ 0.26
PRPF40A-204ENST00000450303 ATRXP46100 2492 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 A0A087WUV0 522 aaPredicted RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 ZCWPW2A0A1B0GU75 182 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CCL22O00626 93 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 PFDN6O15212 129 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 VAPBO95292 243 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 PRAMEF1O95521 474 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 VCLP18206 1134 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 ITGALP20701 1170 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 AKT1P31749 480 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 MC4RP32245 332 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 EPHA4P54764 986 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CLCA4Q14CN2 919 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 FASTKD1Q53R41 847 aaKnown RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 TAF1BQ53T94 588 aaPredicted RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 ABRAXAS1Q6UWZ7 409 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 FAM83HQ6ZRV2 1179 aaPredicted RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 ARHGAP22Q7Z5H3 698 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 AMZ2Q86W34 360 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 KCNMB4Q86W47 210 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 OTUD6BQ8N6M0 293 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 BEND7Q8N7W2 519 aaPredicted RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 OR4L1Q8NH43 312 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CXorf40BQ96DE9 158 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CERS2Q96G23 380 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 SGSM3Q96HU1 749 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CTRCQ99895 268 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CCDC77Q9BR77 488 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 WDR83Q9BRX9 315 aaKnown RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 FAM167BQ9BTA0 163 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 ZCCHC2Q9C0B9 1178 aaKnown RBP16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 FAM96AQ9H5X1 160 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms