RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SIGLEC11Q96RL6 698 aa18.88■□□□□ 0.61
HMGA1-205ENST00000447654 SLC30A2Q9BRI3 323 aa18.88■□□□□ 0.61
HMGA1-205ENST00000447654 TINF2Q9BSI4 451 aa18.88■□□□□ 0.61
HMGA1-205ENST00000447654 ATP6V1HQ9UI12 483 aa18.88■□□□□ 0.61
HMGA1-205ENST00000447654 LEF1Q9UJU2 399 aaPredicted RBP18.88■□□□□ 0.61
HMGA1-205ENST00000447654 RNF6Q9Y252 685 aa18.88■□□□□ 0.61
HMGA1-205ENST00000447654 CITO14578 2027 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 A0A075B6Q4 140 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 HUS1O60921 280 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 PGK1P00558 417 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 F9P00740 461 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 IFNA16P05015 189 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 FGF4P08620 206 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 CYP2A6P11509 494 aaPredicted RBP18.87■□□□□ 0.61
HMGA1-205ENST00000447654 CYP3A5P20815 502 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 RFX2P48378 723 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 PTPN11Q06124 597 aaPredicted RBP18.87■□□□□ 0.61
HMGA1-205ENST00000447654 RAB6CQ53S08 254 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 RABL3Q5HYI8 236 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 TOR1AIP1Q5JTV8 583 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 SHEQ5VZ18 495 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 CAPN13Q6MZZ7 669 aaPredicted RBP18.87■□□□□ 0.61
HMGA1-205ENST00000447654 EID3Q8N140 333 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 CSPG4P5Q96PW8 444 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 OMDQ99983 421 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 UCK2Q9BZX2 261 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 RAB6CQ9H0N0 254 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 TNFRSF12AQ9NP84 129 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 NGRNQ9NPE2 291 aaKnown RBP18.87■□□□□ 0.61
HMGA1-205ENST00000447654 ENTPD7Q9NQZ7 604 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 TMPRSS11EQ9UL52 423 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 SLC45A1Q9Y2W3 748 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 CSNK1G3Q9Y6M4 447 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 HTTP42858 3142 aa18.87■□□□□ 0.61
HMGA1-205ENST00000447654 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 A8MT66 165 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 PPEF2O14830 753 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 RPLP0P05388 317 aaKnown RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 HOXD8P13378 290 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 BDNFP23560 247 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 HOXA11P31270 313 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 HUNKP57058 714 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 SMARCB1Q12824 385 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 SNTA1Q13424 505 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 RCAN2Q14206 197 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 SMAD1Q15797 465 aaKnown RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 STK11Q15831 433 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 ARMCX4Q5H9R4 360 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 TECRLQ5HYJ1 363 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 ZNF782Q6ZMW2 699 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 ADHFE1Q8IWW8 467 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 CNIH3Q8TBE1 160 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 DNAJB14Q8TBM8 379 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 GIMAP5Q96F15 307 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 P2RY11Q96G91 374 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 HPDLQ96IR7 371 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 MAGEB10Q96LZ2 347 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 CCDC115Q96NT0 180 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 FYTTD1Q96QD9 318 aaKnown RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 FBRSL1Q9HCM7 1045 aaKnown RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 CDH9Q9ULB4 789 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 MAGED1Q9Y5V3 778 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 OR6C70A6NIJ9 312 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 PLD2O14939 933 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 PGLSO95336 258 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 FADS2O95864 444 aaKnown RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 ARSAP15289 507 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 FSHRP23945 695 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 KCNK10P57789 538 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 SLAMF1Q13291 335 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 TMEM132DQ14C87 1099 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 OR6B2Q6IFH4 312 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 DPH6Q7L8W6 267 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 HIPK1Q86Z02 1210 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 SLC41A1Q8IVJ1 513 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 RDH10Q8IZV5 341 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 LINC00469Q8N7U9 141 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 OR6J1Q8NGC5 347 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 OR4M1Q8NGD0 313 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 OR52E4Q8NGH9 312 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 L3HYPDHQ96EM0 354 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 CCDC120Q96HB5 630 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 HEXIM2Q96MH2 286 aaKnown RBP18.86■□□□□ 0.61
HMGA1-205ENST00000447654 SLC22A4Q9H015 551 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 ASB7Q9H672 318 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 C3orf14Q9HBI5 128 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 GJD2Q9UKL4 321 aa18.86■□□□□ 0.61
HMGA1-205ENST00000447654 OR2B3O76000 313 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 LBPP18428 481 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 RPS6KA2Q15349 733 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 FBXO43Q4G163 708 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 TXNDC11Q6PKC3 985 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 FAM183BPQ6ZVS7 135 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 C12orf29Q8N999 325 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 UBA3Q8TBC4 463 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 HEXDCQ8WVB3 486 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 TMEM176AQ96HP8 235 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 PIWIL1Q96J94 861 aaKnown RBP18.85■□□□□ 0.61
HMGA1-205ENST00000447654 GSTO2Q9H4Y5 243 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 GORASP2Q9H8Y8 452 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms