RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MYH15Q9Y2K3 1946 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 PIGBOS1A0A0B4J2F0 54 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 KDELR3O43731 214 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 GSRP00390 522 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 JMJD7P0C870 316 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 ZSCAN5DPP0CG00 497 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 SVOPLQ8N434 492 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 P2RY13Q9BPV8 354 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 ACAT2Q9BWD1 397 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 CERS4Q9HA82 394 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 A0A0J9YYE9 177 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF623O75123 536 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 RSL1D1O76021 490 aaKnown RBP8.42□□□□□ -1.06
PTPN3-204ENST00000446349 NUMBP49757 651 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 PLGLB1Q02325 96 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 DSC2Q02487 901 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 CHIT1Q13231 466 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 ZSWIM7Q19AV6 140 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 MYLK3Q32MK0 819 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 PHF19Q5T6S3 580 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 DEF8Q6ZN54 512 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 ZMIZ2Q8NF64 920 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 GPATCH1Q9BRR8 931 aaKnown RBP8.42□□□□□ -1.06
PTPN3-204ENST00000446349 TIGARQ9NQ88 270 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 C1orf109Q9NX04 203 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 SPATA7Q9P0W8 599 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 MAN2B2Q9Y2E5 1009 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 MYH4Q9Y623 1939 aa8.42□□□□□ -1.06
PTPN3-204ENST00000446349 TRIM43BA6NCK2 446 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 GOT2P00505 430 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 NR4A1P22736 598 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SLC7A1P30825 629 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CLCQ05315 142 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TRAP1Q12931 704 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 MSANTD3Q96H12 275 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SCLYQ96I15 445 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 GPER1Q99527 375 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SLC29A3Q9BZD2 475 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 UNKQ9C0B0 810 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 DGKBQ9Y6T7 804 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SCDO00767 359 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 MTRF1O75570 445 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PAPSS2O95340 614 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 LINC00032P0C843 101 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CCND3P30281 292 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 MNDAP41218 407 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CRISP3P54108 245 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CRADDP78560 199 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 GPALPP1Q8IXQ4 340 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 FAM46DQ8NEK8 389 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZBTB10Q96DT7 871 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF726A6NNF4 738 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZBTB22O15209 634 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 BUD23O43709 281 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PRPS1L1P21108 318 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ASPAP45381 313 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TXNL4AP83876 142 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 BST1Q10588 318 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZMYND11Q15326 602 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF852Q6ZMS4 543 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CLEC20AQ6ZU45 233 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF567Q8N184 647 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 OR7A2PQ8NGA2 310 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 DNAJB14Q8TBM8 379 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SLC9A6Q92581 669 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PSMG2Q969U7 264 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 C7orf26Q96N11 449 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 AGAP2Q99490 1192 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PTGES2Q9H7Z7 377 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 MKKSQ9NPJ1 570 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 RGPD1P0DJD0 1748 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 AOC2O75106 756 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SH3BGRLO75368 114 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 REM1O75628 298 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CSNK2A2P19784 350 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 SEMA5AQ13591 1074 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PRAMEF14Q5SWL7 426 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PRAMEF13Q5VWM6 474 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 DCUN1D3Q8IWE4 304 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TWIST2Q8WVJ9 160 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 LPIN3Q9BQK8 851 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ACTL8Q9H568 366 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CMTM6Q9NX76 183 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TACSTD2P09758 323 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ALOX5P09917 674 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CYP4F8P98187 520 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PAOXQ6QHF9 649 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 C10orf107Q8IVU9 208 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 B4GALT7Q9UBV7 327 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 IRS2Q9Y4H2 1338 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 KDM3BQ7LBC6 1761 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ITPKAP23677 461 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ECM1Q16610 540 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PAMR1Q6UXH9 720 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 OR2AJ1Q8NGZ0 328 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 MIEF2Q96C03 454 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms