RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CXorf51AA0A1B0GTR3 108 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 SLC28A1O00337 649 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 FFAR3O14843 346 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 GPR42O15529 346 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 EBLN1P0CF75 366 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 SLC2A4P14672 509 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 MYF6P23409 242 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 NSG1P42857 185 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 MTPNP58546 118 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 SNRPD1P62314 119 aaKnown RBP17.48■□□□□ 0.39
CLDN9-201ENST00000445369 MERTKQ12866 999 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 LRRC66Q68CR7 880 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 TPRG1Q6ZUI0 275 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 TRIM46Q7Z4K8 759 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 GALNT13Q8IUC8 556 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 HM13Q8TCT9 377 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 SCRN2Q96FV2 425 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 KCTD5Q9NXV2 234 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 ZDHHC3Q9NYG2 299 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 PPIL1Q9Y3C6 166 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 RNF103-CHMP3A0A140T963 221 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 GNAO1P09471 354 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 CBSLP0DN79 551 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 CBSP35520 551 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 PIK3CGP48736 1102 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 SEMG2Q02383 582 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 MAD2L1Q13257 205 aaPredicted RBP17.48■□□□□ 0.39
CLDN9-201ENST00000445369 DYNC1I2Q13409 638 aaKnown RBP17.48■□□□□ 0.39
CLDN9-201ENST00000445369 SLC36A3Q495N2 470 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 GLYATQ6IB77 296 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 MBOAT1Q6ZNC8 495 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 RALGPS2Q86X27 583 aaPredicted RBP17.48■□□□□ 0.39
CLDN9-201ENST00000445369 OR8J3Q8NGG0 315 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 PIF1Q9H611 641 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 FARSBQ9NSD9 589 aaKnown RBP17.48■□□□□ 0.39
CLDN9-201ENST00000445369 KLHL42Q9P2K6 505 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 KLQ9UEF7 1012 aa17.48■□□□□ 0.39
CLDN9-201ENST00000445369 EIF3LQ9Y262 564 aaKnown RBP17.48■□□□□ 0.39
CLDN9-201ENST00000445369 EI24O14681 340 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 TGM5O43548 720 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 ALDH3B2P48448 385 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 TUBA4AP68366 448 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 B4GALNT1Q00973 533 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 PTGR1Q14914 329 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLDN9-201ENST00000445369 C22orf39Q6P5X5 142 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 DTWD1Q8N5C7 304 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 BPIFB1Q8TDL5 484 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 OSCP1Q8WVF1 389 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 SLC13A3Q8WWT9 602 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 USP7Q93009 1102 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 NSMCE2Q96MF7 247 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 MCCC1Q96RQ3 725 aaPredicted RBP17.47■□□□□ 0.39
CLDN9-201ENST00000445369 CLK4Q9HAZ1 481 aaKnown RBP17.47■□□□□ 0.39
CLDN9-201ENST00000445369 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 ASIC5Q9NY37 505 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 ZNF639Q9UID6 485 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 SLC8A2Q9UPR5 921 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 HS3ST2Q9Y278 367 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 MYOFQ9NZM1 2061 aa17.47■□□□□ 0.39
CLDN9-201ENST00000445369 TRAV19A0A0A6YYK7 116 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 ABHD14A-ACY1A0A1B0GW23 586 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 LEFTY2O00292 366 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 LDLRP01130 860 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 CDH1P12830 882 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 EPB42P16452 691 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 LHCGRP22888 699 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
CLDN9-201ENST00000445369 HMGCS1Q01581 520 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 PLA2G4EQ3MJ16 856 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 KCTD21Q4G0X4 260 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 PYCR3Q53H96 274 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 B3GNT6Q6ZMB0 384 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 USP45Q70EL2 814 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 RIMKLAQ8IXN7 391 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 GPR65Q8IYL9 337 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 CMTM8Q8IZV2 173 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 ZNF490Q9ULM2 529 aaPredicted RBP17.46■□□□□ 0.39
CLDN9-201ENST00000445369 CCDC160A6NGH7 325 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 LOC730098B7Z3J9 87 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 MANBAO00462 879 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 ULK1O75385 1050 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 STK16O75716 305 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 KCNH1O95259 989 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 GJA1P17302 382 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 HLA-FP30511 346 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 GNPDA1P46926 289 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 PTSQ03393 145 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 ATP13A5Q4VNC0 1218 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 TRIML2Q8N7C3 387 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 ZBTB18Q99592 522 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 SEPHS2Q99611 448 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 COPS8Q99627 209 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 SLC29A3Q9BZD2 475 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 ZBP1Q9H171 429 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 SUV39H2Q9H5I1 410 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 VAPAQ9P0L0 249 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 CEPT1Q9Y6K0 416 aa17.46■□□□□ 0.39
CLDN9-201ENST00000445369 CROCCQ5TZA2 2017 aa17.46■□□□□ 0.38
CLDN9-201ENST00000445369 PTPRSQ13332 1948 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms