RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TNKS2Q9H2K2 1166 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 TMEM39AQ9NV64 488 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 DOLKQ9UPQ8 538 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FAM25AB3EWG3 89 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FAM25CB3EWG5 89 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FAM25GB3EWG6 89 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 OR10H3O60404 316 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 SERPINB7O75635 380 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 IMPDH2P12268 514 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 IL12AP29459 219 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 NANOGP8Q6NSW7 305 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 GOLGA7Q7Z5G4 137 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FBXL20Q96IG2 436 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 RDH12Q96NR8 316 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 NANOGQ9H9S0 305 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PRORSD1PA6NEY8 169 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PER2O15055 1255 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 KDELR3O43731 214 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 NBNO60934 754 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 RSL1D1O76021 490 aaKnown RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 ELFN1P0C7U0 828 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PPM1AP35813 382 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 TUBA3CQ13748 450 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 GRB7Q14451 532 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FNDC3BQ53EP0 1204 aaKnown RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 RAET1GQ6H3X3 334 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF773Q6PK81 442 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PRSS55Q6UWB4 352 aaPredicted RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 L3HYPDHQ96EM0 354 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 AURKBQ96GD4 344 aaPredicted RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF607Q96SK3 696 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FAIM2Q9BWQ8 316 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 ARMC7Q9H6L4 198 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 OGDHLQ9ULD0 1010 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 SLC9A8Q9Y2E8 581 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 hCG_2039718K7EN88 272 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 TP73O15350 636 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 SORBS2O94875 1100 aaKnown RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 POP4O95707 220 aaKnown RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 HAPLN1P10915 354 aaPredicted RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PRPS1L1P21108 318 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PTX3P26022 381 aaPredicted RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 RING1Q06587 406 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 GNA13Q14344 377 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 ATP6AP1Q15904 470 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PGM2L1Q6PCE3 622 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 LYSMD3Q7Z3D4 306 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 ZZZ3Q8IYH5 903 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 EFCAB14O75071 495 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 BMP10O95393 424 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 CYP11A1P05108 521 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 UGT1A6P19224 532 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 UGT1A1P22309 533 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 UGT1A4P22310 534 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 UGT1A3P35503 534 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 UGT1A5P35504 534 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PNLIPRP1P54315 467 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 BNIP3Q12983 259 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 GPR17Q13304 367 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 GCNT6Q5T4J0 391 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 FCGR1BQ92637 280 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 RNFT2Q96EX2 444 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 LIN28AQ9H9Z2 209 aaKnown RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PREBQ9HCU5 417 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 MARCH4Q9P2E8 410 aaPredicted RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 VPS51Q9UID3 782 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 H0YAE9 185 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 SLC22A1O15245 554 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PENKP01210 267 aaPredicted RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PGRP06401 933 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 ADH1AP07327 375 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 C8BP07358 591 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 FDXRP22570 491 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 ARSFP54793 590 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 MYBPC3Q14896 1274 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 FAM92BQ6ZTR7 304 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 TMPRSS11BQ86T26 416 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 ABHD8Q96I13 439 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 FEM1AQ9BSK4 669 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PCDHGA11Q9Y5H2 935 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 CPQQ9Y646 472 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PRR23D1E9PI22 279 aaPredicted RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 H3BM21 787 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PRR23D2P0DMB1 279 aaPredicted RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 HSD17B1P14061 328 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 HTR1EP28566 365 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 CPOXP36551 454 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 CDKN2DP55273 166 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 EPHX4Q8IUS5 362 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 TRIM48Q8IWZ4 208 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 OR10T2Q8NGX3 314 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 NSUN5Q96P11 429 aaKnown RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 PSKH2Q96QS6 385 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 WDR83Q9BRX9 315 aaKnown RBP16.34■□□□□ 0.21
TCOF1-206ENST00000445265 SLC32A1Q9H598 525 aa16.34■□□□□ 0.21
TCOF1-206ENST00000445265 AIG1Q9NVV5 245 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms