RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TMEM9Q9P0T7 183 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 KLHL3Q9UH77 587 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 FBXO5Q9UKT4 447 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 ASF1AQ9Y294 204 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 PCDHGA8Q9Y5G5 932 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 TEX264Q9Y6I9 313 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 E5RI56 91 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 E7ESA3 106 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 AGRPO00253 132 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 ERVK-10P10266 1014 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 PKMP14618 531 aaKnown RBP17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 CHRM3P20309 590 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 CSTF2P33240 577 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 ZBED8Q8IZ13 594 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 SLC22A15Q8IZD6 547 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 PHC3Q8NDX5 983 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 FBXO36Q8NEA4 188 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 RSC1A1Q92681 617 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 CERS2Q96G23 380 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 ZDHHC12Q96GR4 267 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 TRIT1Q9H3H1 467 aaKnown RBP17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 GRHL1Q9NZI5 618 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 PDP2Q9P2J9 529 aa17.01■□□□□ 0.31
SMARCAL1-209ENST00000444508 MN1Q10571 1320 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 ANKRD11Q6UB99 2663 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 A0A1W2PNU3 283 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 A8MU76 341 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 BHMG1C9JSJ3 638 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 CAPN5O15484 640 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 NIPSNAP2O75323 286 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 GPC4O75487 556 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 ACADLP28330 430 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 MLLT3P42568 568 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 PLTPP55058 493 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 GFERP55789 205 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 MPP1Q00013 466 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 C16orf72Q14CZ0 275 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 ZNF789Q5FWF6 425 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 PLEKHS1Q5SXH7 462 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 STEAP4Q687X5 459 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 ARMC6Q6NXE6 501 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 IRGCQ6NXR0 463 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 OOSP2Q86WS3 158 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 MMGT1Q8N4V1 131 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 AGBL5Q8NDL9 886 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 SKA2Q8WVK7 121 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 LCN9Q8WX39 176 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 ART4Q93070 314 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 TGM7Q96PF1 710 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 WDR83Q9BRX9 315 aaKnown RBP17■□□□□ 0.31
SMARCAL1-209ENST00000444508 LRRC1Q9BTT6 524 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 HGH1Q9BTY7 390 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 THSD1Q9NS62 852 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 POLG2Q9UHN1 485 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 COMMD10Q9Y6G5 202 aa17■□□□□ 0.31
SMARCAL1-209ENST00000444508 EPG5Q9HCE0 2579 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 FREM2Q5SZK8 3169 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 PMS2P1A4D2B8 440 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 EIF3HO15372 352 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 KDM1AO60341 852 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 DXOO77932 396 aaKnown RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 SLCO2B1O94956 709 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 TNFSF15O95150 251 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 C9P02748 559 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 CAPNS1P04632 268 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 RPN2P04844 631 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 HGFP14210 728 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 LEPRP48357 1165 aaKnown RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 CARSP49589 748 aaKnown RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 SLC7A5Q01650 507 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 CBLBQ13191 982 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 PRKG2Q13237 762 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 FASTKD3Q14CZ7 662 aaKnown RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 IGF2-ASQ6U949 168 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 KIAA0408Q6ZU52 694 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 TBC1D21Q8IYX1 336 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 CEP112Q8N8E3 955 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 C2CD4AQ8NCU7 369 aaPredicted RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 OR5AR1Q8NGP9 310 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 PYROXD1Q8WU10 500 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 ZNF578Q96N58 590 aaPredicted RBP16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 SLC46A1Q96NT5 459 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 RAB33BQ9H082 229 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 SRMSQ9H3Y6 488 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 SAYSD1Q9NPB0 183 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 HRASLS2Q9NWW9 162 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 EPHA6Q9UF33 1036 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 PISDQ9UG56 409 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 CDYLQ9Y232 598 aa16.99■□□□□ 0.31
SMARCAL1-209ENST00000444508 APC2O95996 2303 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 ACACAQ13085 2346 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 OR6C74A6NCV1 312 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 OR5K3A6NET4 321 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 TOX3O15405 576 aaPredicted RBP16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 RASSF9O75901 435 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 HAUS5O94927 633 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 ITGA2BP08514 1039 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 MAPK10P53779 464 aa16.98■□□□□ 0.31
SMARCAL1-209ENST00000444508 ERVPABLB-1P60509 514 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms