RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ARL5AQ9Y689 179 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 ISPDA4D126 451 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 UROSP10746 265 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 SMUG1Q53HV7 270 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 CES5AQ6NT32 575 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 CCBE1Q6UXH8 406 aaPredicted RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 LIMS2Q7Z4I7 341 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 MICU2Q8IYU8 434 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 OR5K1Q8NHB7 308 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 STAG3L4Q8TBR4 150 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 PROX1Q92786 737 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 REXO5Q96IC2 774 aaKnown RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 TFB2MQ9H5Q4 396 aaKnown RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 KAT8Q9H7Z6 458 aaKnown RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ACOT13Q9NPJ3 140 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 TPRKBQ9Y3C4 175 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 MYADML2A6NDP7 307 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 CD3EAPO15446 510 aaKnown RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 PAGE1O75459 146 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 MFN2O95140 757 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 PAPSS2O95340 614 aaPredicted RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 GLP2RO95838 553 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 NPPAP01160 153 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ALOX12P18054 663 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 HOXD11P31277 338 aaPredicted RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 HUNKP57058 714 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 CXCL17Q6UXB2 119 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 TMC5Q6UXY8 1006 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ADHFE1Q8IWW8 467 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 UBE2FQ969M7 185 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 TP53INP1Q96A56 240 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 SENP8Q96LD8 212 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 MYOCQ99972 504 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 DUSP21Q9H596 190 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ARNT2Q9HBZ2 717 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF236Q9UL36 1845 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 NPEPPSL1A6NEC2 478 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 SLC16A6O15403 523 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 KERAO60938 352 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 KATNA1O75449 491 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 GJB3O75712 270 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 PGLSO95336 258 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 KRT8P05787 483 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 DBTP11182 482 aaKnown RBP19.94■□□□□ 0.78
SHOX2-203ENST00000441443 CXCR2P25025 360 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 GGT5P36269 586 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 FCGRTP55899 365 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ARPC4P59998 168 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF404Q494X3 552 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 CYP4Z1Q86W10 505 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 SLC25A51Q9H1U9 297 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 GORASP2Q9H8Y8 452 aa19.94■□□□□ 0.78
SHOX2-203ENST00000441443 MROH6A6NGR9 719 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 HTR6P50406 440 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 CLCNKBP51801 687 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF135P52742 658 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 TRAF3Q13114 568 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 PWP1Q13610 501 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 GNASQ5JWF2 1037 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 SIRPB2Q5JXA9 342 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 NEK10Q6ZWH5 1172 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 METTL4Q8N3J2 472 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF548Q8NEK5 533 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 OR52B6Q8NGF0 335 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 OR13C4Q8NGS5 318 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 BLOC1S5Q8TDH9 187 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 GIPC2Q8TF65 315 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF566Q969W8 418 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 FCRL2Q96LA5 508 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 YME1L1Q96TA2 773 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 RASSF1Q9NS23 344 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 SCN3BQ9NY72 215 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 VNN3Q9NY84 501 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 AGAP5A6NIR3 686 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 J3KR12 359 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 M0QX08 132 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 HOXC11O43248 304 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 SSX4O60224 188 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 RPS17P08708 135 aaKnown RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF865P0CJ78 1059 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 IGFBP5P24593 272 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 RACK1P63244 317 aaKnown RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 CDC42EP1Q00587 391 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 SLC10A7Q0GE19 358 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 ZNF181Q2M3W8 571 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 CYP20A1Q6UW02 462 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 PHACTR4Q8IZ21 702 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 KIAA1191Q96A73 305 aa19.93■□□□□ 0.78
SHOX2-203ENST00000441443 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 POLR3HQ9Y535 204 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-203ENST00000441443 CXCR6O00574 342 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 LDB2O43679 373 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 RHOBTB1O94844 696 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 GBX1Q14549 363 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 ARMCX6Q7L4S7 300 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 GATAD2AQ86YP4 633 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 TOP6BLQ8N6T0 577 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 CDK5RAP1Q96SZ6 601 aaKnown RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 EIF2B4Q9UI10 523 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms