RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 CCDC78A2IDD5 438 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 OR51F1A6NGY5 319 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 ERI2A8K979 691 aaKnown RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 BTN3A3O00478 584 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 BTN3A1O00481 513 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 CPNE3O75131 537 aaKnown RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 KATNA1O75449 491 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 CDH3P22223 829 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 STIP1P31948 543 aaKnown RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 NSG1P42857 185 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 PREPP48147 710 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 KCNC4Q03721 635 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 CDH17Q12864 832 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 LAMB3Q13751 1172 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 TMTC4Q5T4D3 741 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 SEL1L2Q5TEA6 688 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 FAM199XQ6PEV8 388 aaPredicted RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 PACS1Q6VY07 963 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 ZNF517Q6ZMY9 492 aaPredicted RBP16.33■□□□□ 0.2
COL16A1-204ENST00000440437 TMEM135Q86UB9 458 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 OR13J1Q8NGT2 312 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 OR8K5Q8NH50 307 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 LCN9Q8WX39 176 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 TLR10Q9BXR5 811 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 PITPNM3Q9BZ71 974 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 SRMSQ9H3Y6 488 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 MVB12BQ9H7P6 319 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 ETNK1Q9HBU6 452 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 KCND1Q9NSA2 647 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 SOHLH2Q9NX45 425 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 POLHQ9Y253 713 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 PRSS21Q9Y6M0 314 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 FER1L5A0AVI2 2057 aa16.33■□□□□ 0.2
COL16A1-204ENST00000440437 CDC14CA4D256 554 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 SLC9B1P1A6NJY1 282 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 QSOX1O00391 747 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 SCRG1O75711 98 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 SUN1O94901 812 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 MSL3P1P0C860 447 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 FDFT1P37268 417 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 TLE1Q04724 770 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 ABRQ12979 859 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 GPS2Q13227 327 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 CCDC38Q502W7 563 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 SLC13A5Q86YT5 568 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-204ENST00000440437 TMEM126BQ8IUX1 230 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 TFGQ92734 400 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-204ENST00000440437 HGH1Q9BTY7 390 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 FRMD8P1Q9BZ68 369 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-204ENST00000440437 TSGA10Q9BZW7 698 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 EPN3Q9H201 632 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 ACTL8Q9H568 366 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 ZNF71Q9NQZ8 489 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-204ENST00000440437 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
COL16A1-204ENST00000440437 CCDC162PA2VCL2 907 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 GSAPA4D1B5 854 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ST6GAL1P15907 406 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 PRDX3P30048 256 aaKnown RBP16.31■□□□□ 0.2
COL16A1-204ENST00000440437 GRIA1P42261 906 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 RPS18P62269 152 aaKnown RBP16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ACVR1Q04771 509 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 SEMA5AQ13591 1074 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 LACTB2Q53H82 288 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ZNF789Q5FWF6 425 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ZNF449Q6P9G9 518 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 AMIGO1Q86WK6 493 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 DNAAF3Q8N9W5 541 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 SLC38A9Q8NBW4 561 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 LRFN5Q96NI6 719 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ALS2CR12Q96Q35 445 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 RANBP9Q96S59 729 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 GPR87Q9BY21 358 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 TWSG1Q9GZX9 223 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 RIMKLBQ9ULI2 386 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 GUCA1BQ9UMX6 200 aa16.31■□□□□ 0.2
COL16A1-204ENST00000440437 TNRC6AQ8NDV7 1962 aaKnown RBP16.31■□□□□ 0.2
COL16A1-204ENST00000440437 SLC5A10A0PJK1 596 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 HEATR9A2RTY3 570 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 KRT86O43790 486 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 IFNB1P01574 187 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 FTH1P02794 183 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 ACADLP28330 430 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 PTPN4P29074 926 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 CASRP41180 1078 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 PMS2P54278 862 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 TSTD2Q5T7W7 516 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 PRAMEF17Q5VTA0 474 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 PRUNE1Q86TP1 453 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 GLIS1Q8NBF1 620 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 OR5AR1Q8NGP9 310 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 C1orf54Q8WWF1 131 aa16.3■□□□□ 0.2
COL16A1-204ENST00000440437 SEC14L1Q92503 715 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms