RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TYSND1Q2T9J0 566 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MYLK3Q32MK0 819 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 WDR45BQ5MNZ6 344 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 AGBL4Q5VU57 503 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 OR52E8Q6IFG1 317 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ZCCHC23Q6ZST2 131 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 FRMD7Q6ZUT3 714 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 DSG4Q86SJ6 1040 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SFTPA2Q8IWL1 248 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 RBFAQ8N0V3 343 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 PLD6Q8N2A8 252 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SLC25A41Q8N5S1 370 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 PACRGLQ8N7B6 248 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 GPATCH11Q8N954 259 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 KDM1BQ8NB78 822 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 NCSTNQ92542 709 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TSACCQ96A04 125 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ASB9Q96DX5 294 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 NSMCE3Q96MG7 304 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 AGAP2Q99490 1192 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SEMA3CQ99985 751 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CENPKQ9BS16 269 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 FICDQ9BVA6 458 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MAGEH1Q9H213 219 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TFB2MQ9H5Q4 396 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 BPIFA1Q9NP55 256 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SLC39A10Q9ULF5 831 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 PPM1HQ9ULR3 514 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 RUVBL2Q9Y230 463 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ARHGEF17Q96PE2 2063 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 METTL12A8MUP2 240 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 IFRD1O00458 451 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 HGSO14964 777 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 GPR39O43194 453 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ATP9BO43861 1147 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 DLX3O60479 287 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 PIAS1O75925 651 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MATN4O95460 622 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 IGSF6O95976 241 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 WNT1P04628 370 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 HLA-DQB2P05538 268 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SRPRAP08240 638 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF806P0C7X5 589 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 THEGLP0DJG4 465 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 KITP10721 976 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 C5AR1P21730 350 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 FDXRP22570 491 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ME2P23368 584 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ARNTP27540 789 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ARRB2P32121 409 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CD86P42081 329 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 AFF3P51826 1226 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ADARP55265 1226 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ATP6V0D1P61421 351 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CRADDP78560 199 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 RAD51Q06609 339 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 BCL2L1Q07817 233 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MED21Q13503 144 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CUL3Q13618 768 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CSRP2Q16527 193 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF423Q2M1K9 1284 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SMU1Q2TAY7 513 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 LSM12Q3MHD2 195 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ARL13AQ5H913 290 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MARC1Q5VT66 337 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 FAM46CQ5VWP2 391 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MRNIPQ6NTE8 343 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 C8orf82Q6P1X6 216 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TMEM154Q6P9G4 183 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 GDPD4Q6W3E5 623 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 NAPRTQ6XQN6 538 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ERN2Q76MJ5 926 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CMC1Q7Z7K0 106 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TSPAN33Q86UF1 283 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TICAM1Q8IUC6 712 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CILP2Q8IUL8 1156 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 DEFB107AQ8IZN7 70 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 LSMEM2Q8N112 164 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 PQLC1Q8N2U9 271 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 EID2Q8N6I1 236 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 LPCAT1Q8NF37 534 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 OR13H1Q8NG92 308 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 FOXJ1Q92949 421 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ZUFSPQ96AP4 578 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TRIB3Q96RU7 358 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SLC25A23Q9BV35 468 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TRIM15Q9C019 465 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TCEAL2Q9H3H9 227 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SYTL2Q9HCH5 934 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SCUBE2Q9NQ36 999 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 MBNL1Q9NR56 388 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TM7SF3Q9NS93 570 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 UCKL1Q9NWZ5 548 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 USP36Q9P275 1121 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 HS3ST2Q9Y278 367 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 COL6A6A6NMZ7 2263 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 H0Y3Z8 333 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 STX16-NPEPL1H3BU86 382 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms